 |
Job Description | P43329 | Confidence | 91.09% | Date | Thu Jan 5 12:02:17 GMT 2012 |
Rank | 479 | Aligned Residues | 37 |
% Identity | 27% | Template | c3b5wE_ |
PDB info |
PDB header:membrane protein | Chain: E: PDB Molecule:lipid a export atp-binding/permease protein msba; |
PDBTitle: crystal structure of eschericia coli msba
|
Resolution | 5.30 Å |
|
  |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | R | D | H | Q | V | V | I | V | A | G | E | T | G | S | G | K | T | T | Q | L | P | K | I | C | M | E | L | G | R | G | I | K | G | L | I | G | H |
Query Conservation |   |
|   |   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|   |   |   |   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |
|   |
|   |
|
|
|
|
|
|
| . |
|   |   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |
Template Sequence |   |
I | P | A | G | K | T | V | A | L | V | G | R | S | G | S | G | K | S | T | . |
I | A | S | L | I | T | R | F | Y | D | I | D | E | G | E | I | L | M |
Template Known Secondary structure |   |
 |
| T | T |
|  |  |  |
|
| S | S | T | T | S | S |  |  |  | . |  |  |  |  | T | T | T |
| S |
|
| B | S | S |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
366 | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | |
. | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|