Job Description P43329 Confidence 96.05% Date Thu Jan 5 12:02:17 GMT 2012 Rank 235 Aligned Residues 132 % Identity 19% Template c2w58B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:primosome component (helicase loader); PDBTitle: crystal structure of the dnai Resolution 2.50 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.								.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.
Query Sequence		T	Y	P	D	N	L	P	V	S	Q	K	K	Q	D	I	L	E	A	I	R	D	H	Q	V	.	.	.	.	.	.	.	V	I	V	A	G	E	T	G	S	G	K	T	T	Q	L	P	K	I	C	M	E	L	G	R	G	I	K	G	L	I	G	H	T	Q	P	R	R	L	A	A	R	T	V	A	N	R	I	A	E
Query Conservation																										.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.																																		.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.
Template Sequence		D	V	D	L	N	D	D	G	R	I	K	A	I	R	F	A	E	R	F	V	A	E	Y	E	P	G	K	K	M	K	G	L	Y	L	H	G	S	F	G	V	G	K	T	Y	L	L	A	A	I	A	N	E	L	A	K	R	N	V	S	S	L	I	V	Y	.	.	.	.	.	.	V	P	E	L	F	R	E	L	K	H
Template Known Secondary structure		S					S	T	T														T			T	T											S	S	S	S	S															S	S								.	.	.	.	.	.									T	T
Template Predicted Secondary structure																																																																		.	.	.	.	.	.
Template SS confidence
		1133	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.							.	.	.	1200	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.
Predicted Secondary structure																																																																														.	.
Query SS confidence																																																																														.	.
Query Sequence		E	L	K	T	E	P	G	G	C	I	G	Y	K	V	R	F	S	D	H	V	S	D	N	T	M	V	K	L	M	T	D	G	I	L	L	A	E	I	Q	Q	D	R	L	L	M	Q	Y	D	T	I	I	I	D	E	A	H	E	R	S	L	N	I	D	F	L	L	G	Y	L	K	E	L	L	P	R	R	.	.	P	D
Query Conservation																																																																														.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.														.																					.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.														.
Template Sequence		S	L	Q	D	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	N	E	K	L	D	.	.	Y	I	K	K	V	P	V	L	M	L	D	D	L	.	G	A	E	A	S	S	W	V	R	D	D	V	F	G	P	I	L	Q	Y	R	M	F	E	N
Template Known Secondary structure		T		S	S	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.						S	S							.		S	S									T											T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.														.
Template SS confidence
		1207	.	.	1210	.	.																													.	.	.	.	.	.			.	1220	.	.	.	.	.	.	.	.	.	1230	.		.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	I	I	I	T	S	A	T	I	D	P	E	R	F	S	R	H	F
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		L	P	T	F	F	T	S	N	.	F	D	M	Q	Q	L	A	H	H	L
Template Known Secondary structure									S	.	S
Template Predicted Secondary structure										.
Template SS confidence
		1257	.	.	1260	.	.	.	.		.	.	.	.	.	1270	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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