Job Description P43329 Confidence 100.00% Date Thu Jan 5 12:02:17 GMT 2012 Rank 14 Aligned Residues 291 % Identity 21% Template c2v6jA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:rna helicase; PDBTitle: kokobera virus helicase: mutant met47thr Resolution 2.30 Å

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		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	V	I	V	A	G	E	T	G	S	G	K	T	T	Q	L	P	K	I	C	M	E	L	G	R	G	I	K	G	L	I	G	H	T	Q	P	R	R	L	A	A	R	T	V	A	N	R	I	A	E	E	L	K	T	E	P	G	G	C	I	G	Y	K	V	R	F	S	D	H	V	S	D	N	T	M	V	K	L	M
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Template Sequence		E	L	T	V	L	D	L	H	P	G	A	G	K	T	R	R	V	L	P	Q	L	V	R	E	A	V	K	K	R	L	R	T	V	I	L	A	P	T	R	V	V	A	S	E	T	Y	E	A	L	R	.	.	.	.	.	.	.	.	.	.	.	G	E	P	I	R	Y	.	.	.	.	M	G	N	E	I	V	D	F	M
Template Known Secondary structure										T	T	S		T	T	T	T												T	T								S	S											T	T	.	.	.	.	.	.	.	.	.	.	.	T	S					.	.	.	.					S
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.												.	.	.	.	.	.					.	60	.	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	G	I	L	L	A	E	I	Q	Q	D	R	L	L	M	Q	Y	D	T	I	I	I	D	E	A	H	E	R	S	L	N	I	D	F	L	L	G	Y	L	K	E	L	L	P	R	R	P	D	L	K	I	I	I	T	S	A	T	I	D	P	E	R	F	S	R	H	F	N	N	A	P	I	I	E	V	S	G	R	T
Query Conservation
Alig confidence																																																.													.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.													.	.	.	.	.	.	.	.	.	.
Template Sequence		C	H	S	T	F	T	M	K	L	L	Q	G	V	R	V	P	N	Y	N	L	Y	I	M	D	E	A	H	F	L	D	P	A	S	V	A	A	R	G	Y	I	E	T	R	V	S	M	.	G	D	A	G	A	I	F	M	T	A	T	P	.	.	.	.	.	.	.	.	.	.	P	G	T	T	E	A	F	P	P	S	N
Template Known Secondary structure													T							S						T	T	T			S																	.	T	S								S	S		.	.	.	.	.	.	.	.	.	.	T	T				S	S				S
Template Predicted Secondary structure																																																.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.											.	.	.	.	.	140	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	V	E	V	R	Y	R	P	I	V	E	E	A	D	D	T	E	R	D	Q	L	Q	A	I	F	D	A	V	D	E	L	S	Q	E	S	H	G	D	I	L	I	F	M	S	G	E	R	E	I	R	D	T	A	D	A	L	N	K	L	N	L	R	H	T	E	I	L	P	L	Y	A	R	L	S	N	S	E	Q	N
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.																																	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.																																	.	.	.
Template Sequence		S	P	I	I	D	E	E	T	R	I	P	D	K	A	W	N	S	.	.	.	.	.	.	.	.	.	.	.	G	Y	E	W	I	T	E	F	D	G	R	T	V	W	F	V	H	S	I	K	Q	G	A	E	I	G	T	C	L	Q	K	A	.	.	.	G	K	K	V	L	Y	L	N	R	K	T	F	E	S	E	Y	P
Template Known Secondary structure		S											S	S			S	S	.	.	.	.	.	.	.	.	.	.	.							S		S	S							S	S														T	.	.	.	T								T	T	T					S	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.																																	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.												.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.			.	.	.	.	.	410	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		R	V	F	Q	S	H	S	G	R	R	I	V	L	A	T	N	V	A	E	T	S	L	T	V	P	G	I	K	Y	V	I	D	P	G	T	A	R	I	S	R	Y	S	Y	R	T	K	V	Q	R	L	P	I	E	P	I	S	Q	A	S	A	N	Q	R	K	G	R	C	G	R	V	S	.	.	E	G	I	C	I	R	L
Query Conservation																																																																									.	.
Alig confidence						.	.																				.																			.																											.	.
Template Conservation						.	.																				.																			.
Template Sequence		K	C	K	S	.	.	E	K	W	D	F	V	I	T	T	D	I	S	E	M	G	A	N	F	K	.	A	D	R	V	I	D	P	R	K	T	I	K	P	I	L	L	D	G	.	R	V	S	M	Q	G	P	I	A	I	T	P	A	S	A	A	Q	R	R	G	R	I	G	R	N	P	E	K	L	G	D	I	Y	A	Y
Template Known Secondary structure						.	.	S			S						G	G	G	T	T	S					.		S															S	S	.	S																			T	T	S	S			T	T
Template Predicted Secondary structure						.	.																				.																			.
Template SS confidence
		212	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	E	D	D	F	L	S	R	P	E	F	T	D	P	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	N	V	S	S	D	N	E	G	H	V	S	W	T	E	A
Template Known Secondary structure			S							T	T	B
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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