Job Description P43329 Confidence 95.95% Date Thu Jan 5 12:02:17 GMT 2012 Rank 236 Aligned Residues 135 % Identity 15% Template c2v1uA_ PDB info PDB header:replication Chain: A: PDB Molecule:cell division control protein 6 homolog; PDBTitle: structure of the aeropyrum pernix orc1 protein in complex2 with dna Resolution 3.10 Å

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		81	.	.	.	.	.	.	.	.	90	.	.	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.							.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.																								.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.																								.	.	.	.	.	.
Query Sequence		Q	K	K	Q	D	I	L	E	A	I	R	D	H	.	.	.	.	.	.	Q	V	V	I	V	A	G	E	T	G	S	G	K	T	T	Q	L	P	K	I	C	M	E	.	.	.	.	.	.	L	G	R	G	I	K	G	L	I	G	H	T	Q	P	R	R	L	A	A	R	T	V	A	N	R	I	A	E	E	L	K	T
Query Conservation															.	.	.	.	.	.																								.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.																								.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	L	R	R	L	A	E	V	L	A	P	A	L	R	G	E	K	P	S	N	A	L	L	Y	G	L	T	G	T	G	K	T	A	V	A	R	L	V	L	R	R	L	E	A	R	A	S	S	L	G	V	L	V	K	P	I	Y	V	N	A	R	H	R	E	T	P	Y	R	V	A	S	A	I	A	E	A	V	G	V
Template Known Secondary structure										T	T	G	G	G	T	S	S										B		T	T	S	S																				T										T	T	T	S		S													S
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		E	P	G	G	C	I	G	Y	K	V	R	F	S	D	H	V	S	D	N	T	M	V	K	L	M	T	D	G	I	L	L	A	E	I	Q	Q	D	R	L	L	M	Q	Y	D	T	I	I	I	D	E	A	H	E	R	S	L	N	I	D	F	L	L	G	Y	L	K	E	L	L	P	.	R	R	P	D	L	K	I	I	I
Query Conservation																																																																								.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.																.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Sequence		R	V	P	F	T	G	L	S	V	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Y	E	R	L	V	K	R	L	S	R	L	R	G	I	Y	I	I	V	L	D	E	I	D	F	L	.	P	K	R	P	G	G	Q	D	L	L	Y	R	I	T	R	I	N	Q	E	L	V	S	L	V	G
Template Known Secondary structure					S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	S		S								T	T	T			.			S	T	T											G	G	G
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.																		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		228	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	A	T	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	T	N	S	L	G
Template Known Secondary structure				S		S	T
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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