Job Description P43329 Confidence 99.07% Date Thu Jan 5 12:02:17 GMT 2012 Rank 92 Aligned Residues 207 % Identity 18% Template c2qy9A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:cell division protein ftsy; PDBTitle: structure of the ng+1 construct of the e. coli srp receptor2 ftsy Resolution 1.90 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.									.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.
Query Sequence		Q	R	L	D	S	L	M	L	R	D	R	L	R	F	S	R	R	L	H	G	V	K	K	V	K	N	P	D	A	Q	Q	A	I	F	Q	E	M	A	K	E	I	D	Q	A	A	G	K	V	L	L	R	E	A	A	R	P	E	I	T	.	.	.	.	.	.	.	.	Y	P	D	N	L	P	V	S	Q	K	K	Q	D
Query Conservation																																																													.	.	.	.	.	.	.	.
Alig confidence																														.	.																														.	.	.	.	.	.	.	.
Template Conservation																														.	.
Template Sequence		A	R	L	K	R	S	L	L	K	T	K	E	N	L	G	S	G	F	I	S	L	F	R	G	K	K	I	D	.	.	D	D	L	F	E	E	L	E	E	Q	L	L	I	A	D	V	G	V	E	T	T	R	K	I	I	T	N	L	T	E	G	A	S	R	K	Q	L	R	D	A	E	A	L	Y	G	L	L	K	E	E
Template Known Secondary structure								T	T	T	T	T	T	T	S	T	T							T	T		B		S	.	.														T	T																				T	T			B	G	G	G
Template Predicted Secondary structure																														.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		86	.	.	.	90	.	.	.	.												.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		I	L	E	A	I	R	D	H	Q	.	.	.	.	.	.	.	.	.	.	.	V	V	I	V	A	G	E	T	G	S	G	K	T	T	Q	L	P	K	I	C	M	E	.	L	G	R	G	I	K	G	L	I	G	H	T	Q	P	R	R	L	A	A	R	T	V	A	N	R	I	A	E	E	L	K	T	E	P	G	G	C
Query Conservation											.	.	.	.	.	.	.	.	.	.	.																							.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.																							.																																.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		M	G	E	I	L	A	K	V	D	E	P	L	N	V	E	G	K	A	P	F	V	I	L	M	V	G	V	N	G	V	G	K	T	T	T	I	G	K	L	A	R	Q	F	E	Q	Q	G	K	S	V	M	L	A	A	G	D	T	F	R	A	A	A	V	E	Q	L	Q	V	W	G	Q	R	N	N	.	.	.	.	.	.
Template Known Secondary structure								T	T								S		T	T									T	T	S															T	T	T										T	T															T	T	.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220								.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.
Query Sequence		I	G	Y	K	V	R	F	S	D	H	V	S	D	N	T	M	V	K	L	M	T	D	G	I	L	L	A	E	I	Q	Q	D	R	L	L	M	Q	Y	D	T	I	I	I	D	E	A	H	E	R	S	L	N	I	D	F	L	L	G	Y	L	K	E	L	L	P	R	R	.	.	.	.	.	.	.	P	D	L	K	I	I
Query Conservation																																																																					.	.	.	.	.	.	.
Alig confidence		.	.	.	.												.	.	.	.	.	.																											.																				.	.	.	.	.	.	.
Template Conservation		.	.	.	.												.	.	.	.	.	.																											.
Template Sequence		.	.	.	.	I	P	V	I	A	Q	H	T	G	A	D	.	.	.	.	.	.	S	A	S	V	I	F	D	A	I	Q	A	A	K	A	R	N	I	D	V	L	I	A	D	T	A	G	.	R	L	Q	N	K	S	H	L	M	E	E	L	K	K	I	V	R	V	M	K	K	L	D	V	E	A	P	H	E	V	M	L
Template Known Secondary structure		.	.	.	.							S	T	T			.	.	.	.	.	.															T	T		S									.		G	G	G																T	T	T		T	T			S
Template Predicted Secondary structure		.	.	.	.												.	.	.	.	.	.																											.
Template SS confidence
						349	350	.	.	.	.	.	.	.	.	.							360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	S	A	T	I	D	P	E	R	F	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	D	A	S	T	G	Q	N	A	V	S	Q
Template Known Secondary structure					G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions