Job Description P43329 Confidence 96.67% Date Thu Jan 5 12:02:17 GMT 2012 Rank 203 Aligned Residues 126 % Identity 18% Template c2qgzA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative primosome component; PDBTitle: crystal structure of a putative primosome component from2 streptococcus pyogenes serotype m3. northeast structural3 genomics target dr58 Resolution 2.40 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		V	S	Q	K	K	Q	D	I	L	E	A	I	R	D	H	Q	V	.	.	V	I	V	A	G	E	T	G	S	G	K	T	T	Q	L	P	K	I	C	M	E	L	G	R	G	I	K	G	L	I	G	H	T	Q	P	R	R	L	A	A	R	T	V	A	N	R	I	A	E	E	L	K	T	E	P	G	G	C	I	G	Y
Query Conservation																			.	.
Alig confidence																			.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	F	S	A	I	L	D	F	V	E	Q	Y	P	S	A	E	Q	K	G	L	Y	L	Y	G	D	M	G	I	G	K	S	Y	L	L	A	A	M	A	H	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														S		S	S									S	T	T	S	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.							.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.
Query Sequence		K	V	R	F	S	D	H	V	S	D	N	T	M	V	K	L	M	T	D	G	I	L	L	A	E	I	Q	Q	D	R	L	.	.	.	.	.	.	L	M	Q	Y	D	T	I	I	I	D	E	A	H	E	R	S	L	N	I	D	F	L	L	G	Y	L	K	E	L	L	P	R	R	P	D	L	K	I	I	I	T	S	A
Query Conservation																																	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																										.	.	.	.	.	.																		.	.																.	.
Template Conservation		.	.	.	.	.	.																																																	.	.																.	.
Template Sequence		.	.	.	.	.	.	S	E	K	K	G	V	S	T	T	L	L	H	F	P	S	F	A	I	D	V	K	N	A	I	S	K	E	E	I	D	A	V	K	N	V	P	V	L	I	L	D	D	I	G	A	V	R	D	.	.	E	V	L	Q	V	I	L	Q	Y	R	M	L	E	E	L	.	.	P	T	F	F	T	S	N
Template Known Secondary structure		.	.	.	.	.	.				S																								T	T					T	S	S						T					T	T	.	.	T	T												T		.	.							S
Template Predicted Secondary structure		.	.	.	.	.	.																																																	.	.																.	.
Template SS confidence
								177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.													.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	I	D	P	E	R	F	S	R	H	F	N	N	.	.	.	.	.	.	.	.	.	.	.	.	A	P	I	I	E	V	S	G	R	T	Y
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	Y	S	F	A	D	L	E	R	K	W	A	W	Q	A	K	R	V	M	E	R	V	R	Y	L	A	R	E	F	H	L	E	G	A	N	R
Template Known Secondary structure		.	S							T	T							S																S
Template Predicted Secondary structure		.
Template SS confidence
			257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions