Job Description P43329 Confidence 99.33% Date Thu Jan 5 12:02:17 GMT 2012 Rank 69 Aligned Residues 150 % Identity 24% Template c2px0D_ PDB info PDB header:biosynthetic protein Chain: D: PDB Molecule:flagellar biosynthesis protein flhf; PDBTitle: crystal structure of flhf complexed with gmppnp/mg(2+) Resolution 3.00 Å

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		79	80	.	.	.	.	.	.	.	.	.	90											.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.																																			.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.																																			.	.
Query Sequence		V	S	Q	K	K	Q	D	I	L	E	A	I	.	.	.	.	.	.	.	.	.	.	R	D	H	Q	V	V	I	V	A	G	E	T	G	S	G	K	T	T	Q	L	P	K	I	C	M	E	L	G	R	G	I	K	G	L	.	.	I	G	H	T	Q	P	R	R	L	A	A	R	T	V	A	N	R	I	A	E	E	L
Query Conservation														.	.	.	.	.	.	.	.	.	.																																			.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.																																			.	.
Template Conservation
Template Sequence		V	V	G	K	L	Q	E	I	L	C	D	M	L	P	S	A	D	K	W	Q	E	P	I	H	S	K	Y	I	V	L	F	G	S	T	G	A	G	K	T	T	T	L	A	K	L	A	A	I	S	M	L	E	K	H	K	K	I	A	F	I	T	T	D	T	Y	R	I	A	A	V	E	Q	L	K	T	Y	A	E	L	L
Template Known Secondary structure													T	S			S	T	T	S				S		S	S	B							S	S	S																T	S												S	S	T	T	T	T					T					T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		K	T	E	P	G	G	C	I	G	Y	K	V	R	F	S	D	H	V	S	D	N	T	M	V	K	L	M	T	D	G	I	L	L	A	E	I	Q	Q	D	R	L	L	M	Q	Y	D	T	I	I	I	D	E	A	H	E	R	S	L	N	I	D	F	L	L	G	Y	L	K	E	L	L	P	.	R	R	P	D	L	K	I
Query Conservation																																																																										.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.													.																				.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.													.
Template Sequence		Q	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	V	C	Y	T	K	E	E	F	Q	Q	A	K	E	.	.	L	F	S	E	Y	D	H	V	F	V	D	T	.	A	G	R	N	F	K	D	P	Q	Y	I	D	E	L	K	E	T	I	P	F	E	S	S	I	Q	S	F
Template Known Secondary structure		T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S										.	.	T	T	T	T	S	S							.						S	S	G	G	G	T							S				T	T	B
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.													.
Template SS confidence
		231	.	.																					.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	T	S	A	T	I	D	P	E	R	F	S	R	H	F	N	N	A	P	I	I	E	V	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	L	S	A	T	A	K	Y	E	D	M	K	H	I	V	K	R	F	S	S	V	P	V	N	Q
Template Known Secondary structure						T	T	S						T	T	T	T	T	T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions