Job Description P43329 Confidence 99.06% Date Thu Jan 5 12:02:17 GMT 2012 Rank 95 Aligned Residues 112 % Identity 23% Template c2p6nA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase ddx41; PDBTitle: human dead-box rna helicase ddx41, helicase domain Resolution 2.60 Å

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		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.			.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		F	D	A	V	D	E	L	S	Q	E	S	H	G	D	I	L	I	F	M	S	G	E	R	E	I	R	D	T	A	D	A	L	N	K	L	N	L	R	H	T	E	I	L	P	L	Y	A	R	L	S	N	S	E	Q	N	R	V	F	Q	.	.	S	H	S	G	R	R	I	V	L	A	T	N	V	A	E	T	S	L	T
Query Conservation																																																													.	.
Alig confidence																																					.	.	.																						.	.
Template Conservation																																					.	.	.
Template Sequence		M	V	Y	L	L	E	C	L	Q	K	T	P	P	P	V	L	I	F	A	E	K	K	A	D	V	D	A	I	H	E	Y	L	L	L	K	.	.	.	G	V	E	A	V	A	I	H	G	G	K	D	Q	E	E	R	T	K	A	I	E	A	F	R	E	G	K	K	D	V	L	V	A	T	D	V	A	S	K	G	L	D
Template Known Secondary structure										T	T	S		S							S																.	.	.	T								T	T	S															T	S		S										T	T
Template Predicted Secondary structure																																					.	.	.
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.				.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	G	I	K	Y	V	I	D	P	G	T	A	R	I	S	R	Y	S	Y	R	T	K	V	Q	R	L	P	I	E	P	I	S	Q	A	S	A	N	Q	R	K	G	R	C	G	R	V	S	E	G	I	C	I	R	L	Y	S
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation										.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.																		.	.
Template Sequence		F	P	A	I	Q	H	V	I	.	.	.	.	.	.	.	.	N	Y	D	M	.	.	.	.	.	.	.	.	.	.	P	E	E	I	E	N	Y	V	H	R	I	G	R	T	G	C	T	.	.	G	I	A	T	T	F	I	N
Template Known Secondary structure						S				.	.	.	.	.	.	.	.		S	S		.	.	.	.	.	.	.	.	.	.		S	S									T	T	S				.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		498	.	500	.	.	.	.	.									.	.	.	.											510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.			.	.	.	530	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions