Job Description P43329 Confidence 97.43% Date Thu Jan 5 12:02:17 GMT 2012 Rank 163 Aligned Residues 105 % Identity 18% Template c2kjqA_ PDB info PDB header:replication Chain: A: PDB Molecule:dnaa-related protein; PDBTitle: solution structure of protein nmb1076 from neisseria meningitidis.2 northeast structural genomics consortium target mr101b. Resolution UNK

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Q	V	V	I	V	A	G	E	T	G	S	G	K	T	T	Q	L	P	K	I	C	M	E	L	G	R	G	I	K	G	L	I	G	H	T	Q	P	R	R	L	A	A	R	T	V	A	N	R	I	A	E	E	L	K	T	E	P	G	G	C	I	G	Y	K	V	R	F	S	D	H	V	S	D	N	T	M	V	K	L
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.																.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.																.	.	.
Template Sequence		G	Q	F	I	Y	V	W	G	E	E	G	A	G	K	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	Q	A	W	V	A	Q	A	L	E	A	.	.	.	.	.	G	K	N	A	A	Y	I	D	A	A	S	M	P	L	T	.	.	.
Template Known Secondary structure			S						S	S	S	T	T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	.	.	.	.	.	T								T	T	T	S				.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.																.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																														.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.								.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																															.																															.	.	.	.	.	.	.
Query SS confidence																															.																															.	.	.	.	.	.	.
Query Sequence		M	T	D	G	I	L	L	A	E	I	Q	Q	D	R	L	L	M	Q	Y	D	T	I	I	I	D	E	A	H	E	.	R	S	L	N	I	D	F	L	L	G	Y	L	K	E	L	L	P	R	R	P	D	L	K	I	I	I	T	S	A	T	.	.	.	.	.	.	.	I	D	P	E	R	F	S	R	H	F	N	N	A
Query Conservation																															.																															.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																	.																					.	.									.	.	.	.	.	.	.									.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.																								.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	A	F	E	A	E	Y	L	A	V	D	Q	V	E	K	L	G	N	E	E	Q	A	L	L	F	S	I	F	N	R	F	R	N	S	G	K	.	.	G	F	L	L	L	G	S	E	Y	T	P	Q	Q	L	V	I	R	E	D	L	R	T	R	.	M	A	Y	C
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G	G		S						S	T	T				S																	T		.	.								S	S		T	T	T	S	S									.	G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.																								.
Template SS confidence
															79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.
		245	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	I	E	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	Y	E	V	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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