Job Description P43329 Confidence 99.19% Date Thu Jan 5 12:02:17 GMT 2012 Rank 78 Aligned Residues 167 % Identity 19% Template c2kbeA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase dbp5; PDBTitle: solution structure of amino-terminal domain of dbp5p Resolution UNK

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		82	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure											.	.																			.	.
Query SS confidence											.	.																			.	.
Query Sequence		K	K	Q	D	I	L	E	A	I	.	.	R	D	H	Q	V	V	I	V	A	G	E	T	G	S	G	K	T	T	.	.	Q	L	P	K	I	C	M	E	L	G	R	G	I	K	G	L	I	G	H	T	Q	P	R	R	L	A	A	R	T	V	A	N	R	I	A	E	E	L	K	T	E	P	G	G	C	I	G	Y	K
Query Conservation											.	.																			.	.
Alig confidence											.	.																			.	.																																					.
Template Conservation																																																																					.
Template Sequence		I	Q	E	R	A	L	P	L	L	L	H	N	P	P	R	N	M	I	A	Q	S	Q	S	G	T	G	K	T	A	A	F	S	L	T	M	L	T	R	V	N	P	E	D	A	S	P	Q	A	I	C	L	A	P	S	R	E	L	A	R	Q	T	L	E	V	V	Q	E	.	M	G	K	F	T	K	I	T	S	Q	L	I
Template Known Secondary structure										S	S			S	S							S	S	T	T																		T	T										S	S														.		S	T	T		S
Template Predicted Secondary structure																																																																					.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure											.	.																					.
Query SS confidence											.	.																					.
Query Sequence		V	R	F	S	D	H	V	S	D	.	.	N	T	M	V	K	L	M	T	D	G	I	L	L	A	E	I	Q	Q	D	R	.	L	L	M	Q	Y	D	T	I	I	I	D	E	A	H	E	R	S	L	N	I	D	F	L	L	G	Y	L	K	E	L	L	P	R	R	P	D	L	K	I	I	I	T	S	A	T	I	D	P
Query Conservation											.	.																					.
Alig confidence											.	.																					.
Template Conservation
Template Sequence		V	P	D	S	F	E	K	N	K	Q	I	N	A	Q	V	I	V	G	T	P	G	T	V	L	D	L	M	R	R	K	L	M	Q	L	Q	K	I	K	I	F	V	L	D	E	A	D	N	M	L	D	Q	Q	G	L	G	D	Q	C	I	R	V	K	R	F	L	P	K	D	T	Q	L	V	L	F	S	A	T	F	A	D
Template Known Secondary structure		S	T	T		S			S	S					S						T	T	T							T	T	S			T	T	S															S	T	T												T	T	T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		235				.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		E	.	.	.	R	F	S	R	H	F	N	N	A	P	I	I	E	V
Query Conservation			.	.	.
Alig confidence			.	.	.
Template Conservation
Template Sequence		A	V	R	Q	Y	A	K	K	I	V	P	N	A	N	T	L	E	L
Template Known Secondary structure											S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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