Job Description P43329 Confidence 97.68% Date Thu Jan 5 12:02:17 GMT 2012 Rank 157 Aligned Residues 114 % Identity 16% Template c2ja1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidine kinase; PDBTitle: thymidine kinase from b. cereus with ttp bound as phosphate2 donor. Resolution 2.8 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	H	Q	V	V	I	V	A	G	E	T	G	S	G	K	T	T	Q	L	P	K	I	C	M	E	L	G	R	G	I	K	G	L	I	G	H	T	Q	P	R	R	L	A	A	R	T	V	A	N	R	I	A	E	E	L	K	T	E	P	G	G	C	I	G	Y	K	V	R	F	S	D	H	V	S	D	N	T	M	V
Query Conservation
Alig confidence																													.														.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.
Template Conservation																													.														.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.
Template Sequence		Q	N	G	W	I	E	V	I	C	G	S	M	F	S	G	K	S	E	E	L	I	R	R	V	R	R	T	.	Q	F	A	K	Q	H	A	I	V	F	K	P	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	N	R	Y	S	E	E	.	.	.	.	.	.	.	.	.	D	V	V	S	H	N	G	L
Template Known Secondary structure												S	T	T	S	S													.			T	T									T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T			S	S		S	S	.	.	.	.	.	.	.	.	.					T	T	S
Template Predicted Secondary structure																													.														.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.															.	.	.	.	50	.	.	.										.	.	.	.	.	.	60	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	M	T	D	G	I	L	L	A	E	I	Q	Q	D	R	L	L	M	Q	Y	D	T	I	I	I	D	E	A	H	E	R	S	L	N	I	D	F	L	L	G	Y	L	K	E	L	L	P	R	R	P	D	L	K	I	I	I	T	S	A	T	I	D
Query Conservation
Alig confidence																																															.	.	.	.	.
Template Conservation																																															.	.	.	.	.
Template Sequence		K	V	K	A	V	P	V	S	A	S	K	D	I	F	E	H	I	T	E	E	L	D	V	I	A	I	D	E	V	Q	F	F	D	G	D	I	V	E	V	V	Q	V	L	A	N	.	.	.	.	.	R	G	Y	R	V	I	V	A	G	L	D	Q	D
Template Known Secondary structure									S	S	G	G	G	G	G	G	G			S	S							S	S	G	G	G	S		T	T											.	.	.	.	.	T	T									S	B
Template Predicted Secondary structure																																															.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions