Return to main results Retrieve Phyre Job Id

Job DescriptionP43329
Confidence97.50%DateThu Jan 5 12:02:17 GMT 2012
Rank162Aligned Residues72
% Identity17%Templatec1uaaB_
PDB info PDB header:hydrolase/dnaChain: B: PDB Molecule:protein (atp-dependent dna helicase rep.); PDBTitle: e. coli rep helicase/dna complex
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   83......90.........100.........110 .........120.........130.........140.........150....
Predicted Secondary structure 







...
















Query SS confidence 



























. . .











































Query Sequence  KQDILEAIRDHQVVIVAGETGSGKTTQL. . . PKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCI
Query Conservation 
 


 

  





 










...

 


 
    
 
  







 


 


 


  

  
Alig confidence 



























...











































Template Conservation    
  

       

 
 





      
  

         




 
  
      

   
       
Template Sequence  PGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAREMKERVGQTLGRKEARGL
Template Known Secondary structure 

SS

TTS



GGGSSS
TTTT
S
Template Predicted Secondary structure 






















Template SS confidence 










































































   5....10.........20.........30.........40.........50.........60.........70.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions