Job Description P43329 Confidence 97.08% Date Thu Jan 5 12:02:17 GMT 2012 Rank 179 Aligned Residues 116 % Identity 17% Template c1sxjE_ PDB info
PDB header: replicationChain: E: PDB Molecule: activator 1 40 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna)
Resolution 2.85 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
81 . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 . . . . . . .
Predicted Secondary structure
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Query SS confidence
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Query Sequence
Q K K Q D I L E A I R D H Q V .
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V I V A G E T G S G K T T Q L P K I C M E L G R G I K G L I G H T Q P R R L A A R T V A N R I A E E L K T E P G G C I G Y K
Query Conservation
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Alig confidence
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Template Conservation
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Template Sequence
E L T N F L K S L S D Q P R D L P H L L L Y G P N G T G K K T .
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R C M A L L E S I F G P G V Y R N V V S
Template Known Secondary structure
T T T T T T S T T S S . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T S T T
Template Predicted Secondary structure
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Template SS confidence
21 . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 .
158 . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210 . . . . . . . . . 220 . . . . . . . . . 230 . . .
Predicted Secondary structure
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Query SS confidence
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Query Sequence
V R F S D H V S D N T M V K L M T D G I L L A E I Q Q .
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D R L L M Q Y D T I I I D E A H E R S L N I D F L L G Y L K E L L P R R P D L K I I I T S A T I D
Query Conservation
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Alig confidence
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Template Conservation
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Template Sequence
S P Y H L E I T P S N .
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D R I V I Q E L L K E V A Q M E Q R Y K C V I I N E A N S .
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L T K D A Q A A L R R T M E K Y S K N I R L I M V C D S M S
Template Known Secondary structure
S S . . . . . . T T T T T T S . . S S T T T S S
Template Predicted Secondary structure
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Template SS confidence
90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 . . . . . . . . .
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre serverKelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
