Job Description P43329 Confidence 99.92% Date Thu Jan 5 12:02:17 GMT 2012 Rank 28 Aligned Residues 302 % Identity 20% Template c1oywA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent dna helicase; PDBTitle: structure of the recq catalytic core Resolution 1.80 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		K	K	Q	D	I	L	E	A	I	R	D	H	Q	V	V	I	V	A	G	E	T	G	S	G	K	T	T	.	.	Q	L	P	K	I	C	M	E	L	G	R	G	I	K	G	L	I	G	H	T	Q	P	R	R	L	A	A	R	T	V	A	N	R	I	A	E	E	L	K	T	E	P	G	G	C	I	G	Y	K	V	R
Query Conservation																													.	.
Alig confidence																													.	.							.	.	.	.	.	.																									.
Template Conservation																																					.	.	.	.	.	.																									.
Template Sequence		G	Q	E	E	I	I	D	T	V	L	S	G	R	D	C	L	V	V	X	P	T	G	G	G	K	S	L	C	Y	Q	I	P	A	L	L	.	.	.	.	.	.	L	N	G	L	T	V	V	V	S	P	L	I	S	L	X	K	D	Q	V	D	Q	L	Q	A	.	N	G	V	A	A	A	C	L	N	S	T	Q	T	R
Template Known Secondary structure		T										T	T								S																.	.	.	.	.	.	S	S	S							S															.	T	T								T	T	S
Template Predicted Secondary structure																																					.	.	.	.	.	.																									.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.							.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.
		160	.	.	.	.							.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.																							.															.	.	.
Query SS confidence							.	.	.	.	.	.																							.															.	.	.
Query Sequence		F	S	D	H	V	.	.	.	.	.	.	S	D	N	T	M	V	K	L	M	T	D	G	I	L	L	A	E	I	Q	Q	D	R	.	L	L	M	Q	Y	D	T	I	I	I	D	E	A	H	.	.	.	E	R	S	L	N	I	D	F	L	L	G	Y	L	K	E	L	L	P	R	R	P	D	L	K	I	I	I	T	S
Query Conservation							.	.	.	.	.	.																							.															.	.	.
Alig confidence							.	.	.	.	.	.																							.															.	.	.
Template Conservation
Template Sequence		E	Q	Q	L	E	V	X	T	G	C	R	T	G	Q	I	R	L	L	Y	I	A	P	E	R	L	X	L	D	N	F	L	E	H	L	A	H	W	N	P	V	L	L	A	V	D	E	A	H	C	I	S	Q	W	G	H	D	F	R	P	E	Y	A	A	L	G	Q	L	R	Q	R	F	P	T	L	P	F	X	A	L	T
Template Known Secondary structure														T			S										T	S	T	T						T	T	S								S	S	G	G	G	G		T	T	S	S								G	G	G	G						T	T	S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		A	T	I	D	P	.	.	.	E	R	F	S	R	H	F	N	N	A	P	I	I	E	V	S	G	R	T	Y	P	V	E	V	R	Y	R	P	I	V	E	E	A	D	D	T	E	R	D	Q	L	Q	A	I	F	D	A	V	D	E	L	S	Q	E	S	H	G	D	I	L	I	F	M	S	G	E	R	E	I	R	D	T
Query Conservation							.	.	.
Alig confidence							.	.	.																											.	.	.	.	.	.																			.	.	.
Template Conservation																																				.	.	.	.	.	.																			.	.	.
Template Sequence		A	T	A	D	D	T	T	R	Q	D	I	V	R	L	L	G	L	N	D	P	L	I	Q	I	S	S	F	D	R	P	N	I	R	Y	.	.	.	.	.	.	X	L	X	E	K	F	K	P	L	D	Q	L	X	R	Y	V	Q	E	.	.	.	Q	R	G	K	S	G	I	I	Y	C	N	S	R	A	K	V	E	D	T
Template Known Secondary structure		S															T			S											T	T				.	.	.	.	.	.						S	S												.	.	.	T	T	T								S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.																			.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.							.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.				.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.			.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		A	D	A	L	N	K	L	N	L	R	H	T	E	I	L	P	L	Y	A	R	L	S	N	S	E	Q	N	R	V	F	Q	.	.	S	H	S	G	R	R	I	V	L	A	T	N	V	A	E	T	S	L	T	V	P	G	I	K	Y	V	I	D	P	G	T	A	R	I	S	R	Y	S	Y	R	T	K	V	Q	R	L	P
Query Conservation																																	.	.
Alig confidence									.	.	.																						.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	R	L	Q	S	K	.	.	.	G	I	S	A	A	A	Y	H	A	G	L	E	N	N	V	R	A	D	V	Q	E	K	F	Q	R	D	D	L	Q	I	V	V	A	T	V	A	F	G	X	G	I	N	K	P	N	V	R	F	V	V	H	F	D	I	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	.	.	.	T								T	T	S														T	T	S		S						T	T	S		T	T	T			T	T							S	S			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.				260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.		.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		I	E	P	I	S	Q	A	S	A	N	Q	R	K	G	R	C	G	R	V	.	S	E	G	I	C	I	R	L	Y	S	E	D	D	F	L	S	R
Query Conservation																					.
Alig confidence		.	.	.	.																.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	N	I	E	S	Y	Y	Q	E	T	G	R	A	G	R	D	G	L	P	A	E	A	X	L	F	Y	D	P	A	D	X	A	W	L
Template Known Secondary structure		.	.	.	.	S									T	T	S		T	T	S	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions