Return to main results Retrieve Phyre Job Id

Job DescriptionP43329
Confidence96.21%DateThu Jan 5 12:02:17 GMT 2012
Rank229Aligned Residues118
% Identity10%Templatec1jr3E_
PDB info PDB header:transferaseChain: E: PDB Molecule:dna polymerase iii, delta' subunit; PDBTitle: crystal structure of the processivity clamp loader gamma2 complex of e. coli dna polymerase iii
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   81........90.... .....100.........110.........120.........130.........140.........150.......
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Query Sequence  QKKQDILEAIRDHQ. . . VVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYK
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Template Sequence  PDFEKLVASYQAGRGHHALLIQALPGMGDDALI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . YALSRYLLCQQPQGHKSC
Template Known Secondary structure  TTTTTS


S

TTSS.............................T
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   910.........20.........30.........40. ........50.........
 
   158.160.........170.........180.........190.........200.........210.........220.
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Query Sequence  . . . . . . . . . . . . . . . . VRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRP
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Template Sequence  GHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAAL. . LTDAAANALLKTLEEPPA
Template Known Secondary structure  S
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TTSSSB
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   60.........70.........80.........90.........100.........110......... 120.........130.......
 
   222.......
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Query Sequence  DLKIIITS
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Template Sequence  ETWFFLAT
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   138.140.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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