Job Description P0A772 Confidence 97.27% Date Thu Jan 5 11:04:59 GMT 2012 Rank 47 Aligned Residues 125 % Identity 16% Template c3lcmB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of smu.1420 from streptococcus mutans ua159 Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.			10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.																																		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.
Predicted Secondary structure											.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	Q	L	V	Y	F	S	S	.	.	S	S	E	N	T	Q	R	F	I	E	R	L	G	L	P	A	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	L	N	E	R	E	R	I	Q	V	D	E	P	Y	I	L	I
Query Conservation											.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	I	L	I	V	Y	T	H	P	N	P	T	S	F	N	A	E	I	L	K	Q	V	Q	T	N	L	S	K	E	H	T	V	S	T	L	D	L	Y	A	E	H	F	D	P	V	L	Q	F	N	E	T	H	K	R	R	D	L	A	K	V	A	E	M	E	K	Y	R	D	L	V	T	W	A	D	H	L	I	F	I
Template Known Secondary structure											S		T	T	S													S		T	T	S							T	T	T	T	T								S	S	S	S		G	G	G	G	G	G		G	G	G											S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.																	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.							.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Query Sequence		V	P	S	Y	G	G	G	G	T	A	G	A	V	P	R	Q	V	I	R	F	L	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	N	R	A	L	L	R	G	V	I	A	S	G	N	R	N	F	G	E	.	.	.	.	.	.	A	Y	G	R	A	G	D	V	I	A	R	K	C	G	V
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Alig confidence						.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation						.	.	.	.	.
Template Sequence		F	P	I	W	.	.	.	.	.	W	S	G	M	P	A	I	L	K	G	F	I	D	R	V	F	V	A	D	F	A	Y	S	Y	K	K	V	G	L	E	G	H	L	Q	G	K	S	A	W	I	I	T	T	H	N	T	P	S	F	A	M	P	F	V	Q	D	Y	G	K	V	L	K	K	Q	I	L	K	P	C	A	I
Template Known Secondary structure					B	.	.	.	.	.	T	T	B													S		B	T	T	T					S	S	S						T	T										S	S		G	G	G	G	G	G	S	S		T	T							T	T	T	T	T	T
Template Predicted Secondary structure						.	.	.	.	.
Template SS confidence
		81	.	.	.						.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		P	W	L	Y	R	F	E	L	M	G	T	Q	S	.	D	I	E	N	V	R	K	G	V	T	E	F	W	Q
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		S	P	V	K	L	T	E	L	T	S	I	E	K	I	S	D	D	E	R	Q	K	L	L	H	K	V	A	Q
Template Known Secondary structure											S	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions