Job Description P0A772 Confidence 28.82% Date Thu Jan 5 11:04:59 GMT 2012 Rank 75 Aligned Residues 130 % Identity 14% Template c3ha2B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nadph-quinone reductase; PDBTitle: crystal structure of protein (nadph-quinone reductase) from2 p.pentosaceus, northeast structural genomics consortium target ptr24a Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.														40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	Q	L	V	Y	F	S	S	S	S	E	N	T	Q	R	F	I	E	R	L	G	L	P	A	V	R	I	P	L	N	E	R	E	R	I	Q	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	Y	I	L	I	V	P	S	Y	G	G	G	G	T	A	G	A	V	P	R	Q	V	I	R	F	L	N
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.
Template Sequence		X	Q	T	L	I	I	V	A	H	P	E	L	A	R	S	N	T	Q	P	F	F	K	A	A	I	E	N	F	S	N	V	T	W	H	P	L	V	A	D	F	N	V	E	Q	E	Q	S	L	L	L	Q	N	D	R	I	I	L	E	F	P	L	Y	W	Y	S	.	.	.	.	.	A	P	A	L	L	K	Q	W	X	D
Template Known Secondary structure											T	T	G	G	G		S	S									T	T		T	T								T	T												T		S									B	T	T	B	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.
		68	.														70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.											.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	H	N	R	A	L	L	R	G	V	I	A	S	G	N	R	N	F	G	.	.	.	.	.	.	.	.	.	.	E	A	Y	G	R	A	G	D	V	I	A	R	K	C	G	V	P	W	L	Y	R	F	E	L	M	G	T	Q	S	D	I	E	N	V	R	K	G
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	X	T	T	K	F	A	T	G	H	Q	Y	A	L	E	G	K	E	L	G	I	V	V	S	T	G	D	N	G	N	A	F	Q	A	G	A	A	E	K	F	T	I	S	E	L	X	R	P	F	E	A	F	A	N	K	T	K	X	X	Y	L	P	I	L	A	V	H	Q	F	L	Y	L	E	P	D	A	Q	Q	R
Template Known Secondary structure				S						S	T	T	T		T	T	T	T										S	S		G	G	G	S	S	T	T	S	T	T		S						T										T	T											S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	E	F	W	Q	R	Q	P	Q	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	V	A	Y	Q	Q	Y	A	T	N
Template Known Secondary structure												S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions