Job Description P0A772 Confidence 93.48% Date Thu Jan 5 11:04:59 GMT 2012 Rank 55 Aligned Residues 128 % Identity 10% Template c3f2vA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:general stress protein 14; PDBTitle: crystal structure of the general stress protein 142 (tde0354) in complex with fmn from treponema denticola,3 northeast structural genomics consortium target tdr58. Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.																				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	L	V	Y	F	S	S	S	S	E	N	T	Q	R	F	I	E	R	L	G	L	P	A	V	R	I	P	L	N	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	I	Q	V	D	E	P	Y	I	L	I	V	P	S	Y	G	G	G	G	T	A	G	A	V	P	R	Q	V
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																																																																								.	.
Template Sequence		K	T	L	I	I	L	A	H	P	N	I	S	Q	S	T	V	H	K	H	W	S	D	A	V	R	Q	H	T	D	R	F	T	V	H	E	L	Y	A	V	Y	P	Q	G	K	I	D	V	A	A	E	Q	K	L	I	E	T	H	D	S	L	V	W	Q	F	P	I	Y	W	F	N	.	.	C	P	P	L	L	K	Q	W
Template Known Secondary structure										T	T	G	G	G		S										T	T		T	T	T											T	T														T	S	S	S								B	T	T	B	.	.
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80
		63	.	.	.										.	.	.	70	.	.	.	.	.	.	.	.	.	80	.												.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.							.
Query SS confidence						.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.							.
Query Sequence		I	R	F	L	.	.	.	.	.	.	.	.	.	N	D	E	H	N	R	A	L	L	R	G	V	I	A	S	.	.	.	.	.	.	.	.	.	.	.	G	N	R	N	F	G	.	E	A	Y	G	R	A	G	D	V	I	A	R	K	C	G	V	P	W	L	Y	R	F	E	L	M	G	T	Q	S	D	I	E	N	V
Query Conservation						.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.							.
Alig confidence						.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation
Template Sequence		L	D	E	V	L	T	Y	G	W	A	Y	G	S	K	G	K	A	L	K	G	R	K	I	A	L	A	V	S	L	G	A	P	A	A	D	Y	R	A	D	G	A	V	G	C	S	V	A	E	V	L	R	P	F	E	L	T	A	K	Y	C	N	A	D	Y	R	P	P	F	T	F	H	T	S	E	A	A	R	Q	E	V
Template Known Secondary structure						S		B	T	T	T	B	S	S	S			S	S	T	T										S	S		G	G	G	S	S	T	T	S	S	S		S																T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		122	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	G	V	T	E	F	W	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	S	A	R	D	Y	L	A	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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