Job Description P0A772 Confidence 99.86% Date Thu Jan 5 11:04:59 GMT 2012 Rank 16 Aligned Residues 131 % Identity 14% Template c2wc1A_ PDB info PDB header:electron transport Chain: A: PDB Molecule:flavodoxin; PDBTitle: three-dimensional structure of the nitrogen fixation2 flavodoxin (niff) from rhodobacter capsulatus at 2.2 a Resolution 2.17 Å

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		1	.	.	.		.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.									.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.								60	.	.	.	.
Predicted Secondary structure						.																			.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Query SS confidence						.																			.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Query Sequence		M	S	Q	L	.	V	Y	F	S	S	S	S	E	N	T	Q	R	F	I	E	R	L	G	.	.	.	.	.	.	.	.	L	P	A	V	R	I	P	L	N	E	R	E	R	I	Q	V	D	E	P	Y	I	L	I	V	P	S	Y	G	G	G	G	T	A	G	A	V	P	.	.	.	.	.	.	.	R	Q	V	I	R
Query Conservation						.																			.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Alig confidence						.																			.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	A	K	I	G	L	F	F	G	S	D	T	G	T	T	R	K	I	A	K	Q	I	K	D	M	F	D	D	E	V	M	A	K	P	L	N	V	N	R	A	D	V	A	D	F	M	A	Y	D	F	L	I	L	G	T	P	T	L	G	D	G	Q	L	P	G	L	S	A	N	A	A	S	E	S	W	E	E	F	L	P
Template Known Secondary structure				S								S	S	S											T	T	S		T	T	T	B						G	G	G										S									B	T	T	T	B		S	S	G	G	G	T		S	S							G	G
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.																									110	.	.	.	.	.	.
Predicted Secondary structure																							.																	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	L	N	D	E	H	N	R	A	L	L	R	G	V	I	A	S	G	N	R	N	.	F	G	E	A	Y	G	R	A	G	D	V	I	A	R	K	C	.	.	.	G	V	P	W	L	Y	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	M	G	T	Q	S
Query Conservation																							.																	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	A	D	Q	D	F	S	G	K	T	I	A	L	F	G	L	G	D	Q	V	T	Y	P	L	E	F	V	N	A	L	F	F	L	H	E	F	F	S	D	R	G	A	N	V	V	G	R	W	P	A	K	G	Y	G	F	E	D	S	L	A	V	V	E	G	E	F	L	G	L	A	L	D	Q	D	N	Q	A	A	L
Template Known Secondary structure		G	G	T	T				T	T											T	T	T		T	T	S	T	T	T											T	T	T										T	T	S			S			T	T			T	T			S	S					T	T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	E	N	V	R	K	G	V	T	E	F	W	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	E	R	L	K	G	W	L	S	L	I	A	A	D
Template Known Secondary structure													T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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