Job Description P76542 Confidence 98.65% Date Thu Jan 5 12:24:15 GMT 2012 Rank 24 Aligned Residues 98 % Identity 15% Template c3lysC_ PDB info PDB header:recombination Chain: C: PDB Molecule:prophage pi2 protein 01, integrase; PDBTitle: crystal structure of the n-terminal domain of the prophage2 pi2 protein 01 (integrase) from lactococcus lactis,3 northeast structural genomics consortium target kr124f Resolution 2.80 Å

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		104	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure														.																																																	.
Query SS confidence														.																																																	.
Query Sequence		G	F	K	K	V	A	E	D	W	F	A	T	.	R	V	G	G	W	S	E	S	Y	A	K	Q	V	R	S	A	L	E	K	D	V	Y	P	V	L	G	K	R	S	I	V	D	I	T	A	R	D	V	L	A	L	L	Q	K	K	E	R	T	.	A	P	E	Q	A	R	K	L	R	R	R	I	G	E	I	F	K	F
Query Conservation														.																																																	.
Alig confidence														.																			.																														.
Template Conservation																																	.
Template Sequence		E	I	S	E	Y	F	K	D	W	X	E	L	Y	K	K	N	A	I	D	E	X	T	Y	K	G	Y	E	Q	T	L	K	.	Y	L	K	T	Y	X	P	N	V	L	I	S	E	I	T	A	S	S	Y	Q	R	A	L	N	K	F	A	E	T	H	A	K	A	S	T	K	G	F	H	T	R	V	R	A	S	I	Q	C
Template Known Secondary structure		B													T	T	T	T	S														.						S	S	S		B	T	T	T															T	T	S
Template Predicted Secondary structure																																	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	I	T	E	L	V	T	R	N	P	V	A	D	L	D	T	A	L	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	E	E	G	R	L	Q	K	D	F	T	T	R	A	V	V	K	G	L	E
Template Known Secondary structure						T		S	S	S		S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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