 |
Job Description | P76542 | Confidence | 6.27% | Date | Thu Jan 5 12:24:15 GMT 2012 |
Rank | 75 | Aligned Residues | 44 |
% Identity | 23% | Template | c3llhB_ |
PDB info |
PDB header:rna binding protein | Chain: B: PDB Molecule:risc-loading complex subunit tarbp2; |
PDBTitle: crystal structure of the first dsrbd of tar rna-binding protein 2
|
Resolution | 2.14 Å |
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | L | L | V | H | P | N | G | S | K | Y | W | R | F | R | Y | W | L | N | K | R | E | F | L | Q | A | I | G | V | Y | P | L | I | T | L | K | E | A | R | R | R | A | T | E | S | R | S | L | I |
Query Conservation |   |
  |
|   |
|   |   |   |
|   |
|   |
|   |   |
|   |   |   |   |
|
|
|   |   |   |   |
|
|   |   |   |   |   |
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   | . |   |
|   |
|   | . | . | . | . |
|
|
|   |
|
|
|   |
|
|   |   |
|
|   |   |
Template Sequence |   |
Y | D | L | L | K | A | E | G | Q | P | N | F | T | F | R | V | T | V | G | D | T | S | C | . |
T | G | Q | G | P | . |
. |
. |
. |
S | K | K | A | A | K | H | K | A | A | E | V | A | L | K | H |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  | T | T |  |  |  | . |  |  |  |  | S | . | . | . | . | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
. | . | . | . | 60 | |
|
|
|
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|