Job Description P76542 Confidence 99.83% Date Thu Jan 5 12:24:15 GMT 2012 Rank 9 Aligned Residues 93 % Identity 43% Template c3ju0A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:phage integrase; PDBTitle: structure of the arm-type binding domain of hai7 integrase Resolution 1.60 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	A	K	A	I	D	A	A	Q	P	Q	D	K	P	Y	K	L	T	D	S	L	T	P	G	L	F	L	L	V	H	P	N	G	S	K	Y	W	R	F	R	Y	W	L	N	K	R	E	F	L	Q	A	I	G	V	Y	P	L	I	T	L	K	E	A	R	R	R	A	T	E	S	R	S	L	I	A	N	G	I	N
Query Conservation
Alig confidence																								.	.
Template Conservation																								.	.
Template Sequence		L	T	D	S	K	V	K	N	A	K	S	L	E	K	E	Y	K	L	T	D	G	F	.	.	G	M	H	L	L	V	H	P	N	G	S	K	Y	W	R	L	S	Y	R	F	E	K	K	Q	R	L	L	A	L	G	V	Y	P	A	V	S	L	A	D	A	R	Q	R	R	D	E	A	K	K	L	L	A	A	G	I	D
Template Known Secondary structure														S	S								T	.	.	T							T	T	S											T	T											T	T	S																		T	T
Template Predicted Secondary structure																								.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	E	Q	A	R	K	E	K	A	I	D	A	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	S	A	K	K	Q	A	D	N	K	T	I	Q	E	K
Template Known Secondary structure		G	G	G	S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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