Job Description P76542 Confidence 99.79% Date Thu Jan 5 12:24:15 GMT 2012 Rank 12 Aligned Residues 76 % Identity 41% Template c3jtzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:integrase; PDBTitle: structure of the arm-type binding domain of hpi integrase Resolution 1.30 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	A	K	A	I	D	A	A	Q	P	Q	D	K	P	Y	K	L	T	D	S	L	T	P	G	L	F	L	L	V	H	P	N	G	S	K	Y	W	R	F	R	Y	W	L	N	K	R	E	F	L	Q	A	I	G	V	Y	P	L	I	T	L	K	E	A	R	R	R	A	T	E	S	R	S	L	I	A	N	G
Query Conservation
Alig confidence																							.	.
Template Conservation																							.	.
Template Sequence		L	T	D	A	K	I	R	T	L	K	P	S	D	K	P	F	K	V	S	D	S	.	.	H	G	L	Y	L	L	V	K	P	G	G	S	R	H	W	Y	L	K	Y	R	I	S	G	K	E	S	R	I	A	L	G	A	Y	P	A	I	S	L	S	D	A	R	Q	Q	R	E	G	I	R	K	M	L	A	L	N
Template Known Secondary structure														S	S							S	.	.	T	T							T	T	S											T	T										T	T	T	S																	T
Template Predicted Secondary structure																							.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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