Job Description P76542 Confidence 97.78% Date Thu Jan 5 12:24:15 GMT 2012 Rank 29 Aligned Residues 169 % Identity 15% Template c2v6eB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:protelemorase; PDBTitle: protelomerase telk complexed with substrate dna Resolution 3.20 Å

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		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.					.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.																							.	.	.	.	.
Query SS confidence																																																			.	.	.	.																							.	.	.	.	.
Query Sequence		R	A	G	S	V	Q	I	Q	T	A	I	R	L	L	I	L	T	A	L	R	T	A	E	L	R	L	C	R	W	E	W	I	N	L	E	D	A	T	I	T	L	P	A	E	V	M	K	A	R	.	.	.	.	R	P	H	V	V	P	L	S	R	Q	A	V	E	L	L	Q	D	Q	F	T	R	S	.	.	.	.	.
Query Conservation																																																			.	.	.	.																							.	.	.	.	.
Alig confidence																												.																							.	.	.	.																							.	.	.	.	.
Template Conservation																												.
Template Sequence		T	T	R	R	G	M	A	P	L	A	F	A	L	A	A	L	S	G	R	R	M	I	E	I	M	L	.	Q	G	E	F	S	V	A	G	K	Y	T	V	T	F	L	G	Q	A	K	K	R	S	E	D	K	G	I	S	R	K	I	Y	T	L	C	D	A	T	L	F	V	S	L	V	N	E	L	R	S	C	P	A	A
Template Known Secondary structure		S	S	T	G	G	G																				T	.	T							S	S	S								T	T					S										S	S													T	T	S	G	G	G
Template Predicted Secondary structure																												.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
											296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.										.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	G	Y	S	A	F	V	F	P	G	R	F	M	D	K	P	L	S	A	S	A	I	L	K	A	L	E	R	I	G	Y	K	S	I	A	T	G	H	G	W	R	T	T	F	S	T	A	L	N	E	.	.	.	.	.	.	.	.	.	S	G	R	Y	S	P	D	W	I	E	I	Q	L
Query Conservation		.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	F	D	E	V	I	K	G	Y	G	E	N	D	T	R	S	E	N	G	R	I	N	A	I	L	A	T	A	F	N	P	W	V	K	T	F	L	G	D	D	R	R	V	Y	K	D	S	R	A	I	Y	A	R	I	A	Y	E	M	F	F	R	V	D	P	R	W	K	N	V	D	E	D	V	F	F	M	E	I	L
Template Known Secondary structure		T	T					T	T		S	S	T	T																										S	S	S	S			T	T															T	T	T	S	G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.															.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	H	V	P	K	G	I	R	G	V	Y	N	Q	A	A	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	R	R	A	M	M	Q	D	Y	A	D	A	I	D	S	I	L	A	G	N
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		G	H	D	D	E	N	T	Q	L	H	Y	K	Q	F	K	.	L	A	N	F	S	R	T	W	R	P	N	V	G	E	E	N	A	R	L	A	A	L	Q	K	L	D	S	M	M	P	D	F	A	R	G	D
Template Known Secondary structure		T		S	S	T	T	G	G	G	S	S					.			S			T	T																	T	S	G	G	G	S	S	S	S	S	S	S	T
Template Predicted Secondary structure																	.
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions