Return to main results Retrieve Phyre Job Id

Job DescriptionP76542
Confidence5.45%DateThu Jan 5 12:24:15 GMT 2012
Rank89Aligned Residues45
% Identity16%Templatec2l2nA_
PDB info PDB header:rna binding protein, plant proteinChain: A: PDB Molecule:hyponastic leave 1; PDBTitle: backbone 1h, 13c, and 15n chemical shift assignments for the first2 dsrbd of protein hyl1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60.........70.........80
Predicted Secondary structure 












Query SS confidence 















































Query Sequence  LLVHPNGSKYWRFRYWLNKREFLQAIGVYPLITLKEARRRATESRSLI
Query Conservation 
 
   
 
 
  
    


    

     
  


  
       
Alig confidence 




























...















Template Conservation     
  
   
   
 
 
        
 ...


 

  

  

  
Template Sequence  VKEGPSHKSLFQSTVILDGVRYNSLPGFF. . . NRKAAEQSAAEVALRE
Template Known Secondary structure  S
SSS
TT

S
BS...S
Template Predicted Secondary structure 













...
Template SS confidence 















































   37..40.........50.........60..... ....70.........80.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions