Job Description P76542 Confidence 98.73% Date Thu Jan 5 12:24:15 GMT 2012 Rank 21 Aligned Residues 103 % Identity 22% Template c2khqA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:integrase; PDBTitle: solution nmr structure of a phage integrase ssp19472 fragment 59-159 from staphylococcus saprophyticus,3 northeast structural genomics consortium target syr103b Resolution UNK

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		104	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure														.																																																	.
Query SS confidence														.																																																	.
Query Sequence		G	F	K	K	V	A	E	D	W	F	A	T	.	R	V	G	G	W	S	E	S	Y	A	K	Q	V	R	S	A	L	E	K	D	V	Y	P	V	L	G	K	R	S	I	V	D	I	T	A	R	D	V	L	A	L	L	Q	K	K	E	R	T	.	A	P	E	Q	A	R	K	L	R	R	R	I	G	E	I	F	K	F
Query Conservation														.																																																	.
Alig confidence														.																			.																														.
Template Conservation																																	.
Template Sequence		T	F	A	D	Y	F	Y	Q	W	Y	E	V	N	K	L	P	H	V	S	E	S	T	K	R	H	Y	E	S	A	Y	K	.	H	I	K	D	H	F	R	H	K	L	L	K	D	I	K	R	T	E	Y	Q	K	F	L	N	E	Y	G	L	T	H	S	Y	E	T	I	R	K	L	N	S	Y	I	R	N	A	F	D	D
Template Known Secondary structure		B													T	G	G	G	S														.							S	S		B	G	G	G																	S
Template Predicted Secondary structure																																	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	I	T	E	L	V	T	R	N	P	V	A	D	L	D	T	A	L	K	A	R	R	P	G	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	H	E	G	Y	V	I	K	N	P	T	Y	K	A	E	L	H	A	S	V	L	E	H	H	H
Template Known Secondary structure					T	T						G	G	G	G						G	G	G
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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