Job Description P76542 Confidence 96.16% Date Thu Jan 5 12:24:15 GMT 2012 Rank 31 Aligned Residues 138 % Identity 19% Template c2f4qA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:type i topoisomerase, putative; PDBTitle: crystal structure of deinococcus radiodurans topoisomerase ib Resolution 1.75 Å

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		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		Q	I	Q	T	A	I	R	L	L	I	L	T	A	L	R	T	A	.	E	L	R	L	C	R	W	E	W	I	N	L	E	D	A	T	I	T	L	P	A	E	V	M	K	A	R	R	P	H	V	V	P	L	S	R	Q	A	V	E	L	L	Q	D	Q	F	T	R	S	G	Y	S	A	F	V	F	P	G	R	F	M	D
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		V	X	A	L	X	T	R	L	L	H	V	A	R	F	R	V	T	Y	G	L	S	T	L	R	Q	R	H	V	V	V	D	G	N	T	V	T	F	R	F	K	G	K	H	G	V	S	Q	H	K	A	T	S	D	R	T	L	A	A	N	X	Q	K	L	L	D	L	P	G	P	W	L	F	Q	T	V	D	A	G	G	G
Template Known Secondary structure																					G	G	G		B	G	G	G					T	T									G	G	G																					T	S		S	S	B	S	S					S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		309			310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.																			350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	.	.	P	L	S	A	S	A	I	L	K	A	L	E	R	I	G	Y	K	S	I	A	T	G	H	G	W	R	T	T	F	S	T	A	L	N	E	S	G	R	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	W	I	E	I	Q	L	A	H	V	P	K	G	I	R	G	V	Y
Query Conservation			.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.																	.	.																				.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.																				.
Template Sequence		E	R	R	R	I	H	S	T	E	L	N	A	Y	L	R	E	V	I	G	.	.	P	F	T	A	K	D	F	R	T	W	G	G	T	L	L	A	A	E	Y	.	L	A	Q	Q	G	T	E	S	S	E	R	Q	A	K	K	V	L	V	D	C	V	K	F	V	A	D	D	L	G	N	T	P	A	V	T	R	G	S	Y
Template Known Secondary structure																				T	.	.	T	S																		.								S	S																				T										T
Template Predicted Secondary structure																					.	.																				.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		369	370
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	C
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		290	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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