Job Description P24203 Confidence 98.75% Date Thu Jan 5 11:41:12 GMT 2012 Rank 28 Aligned Residues 151 % Identity 21% Template c3md0A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:arginine/ornithine transport system atpase; PDBTitle: crystal structure of arginine/ornithine transport system2 atpase from mycobacterium tuberculosis bound to gdp (a ras-3 like gtpase superfamily protein) Resolution 2.45 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		P	I	A	V	T	L	L	T	G	F	L	G	A	G	K	T	T	L	L	R	H	I	L	N	E	.	.	Q	H	G	Y	K	I	A	V	I	E	N	E	F	G	E	V	S	V	D	D	Q	L	I	G	D	R	A	T	Q	I	K	T	L	T	N	G	C	I	C	C	S	R	S	N	E	L	E	D	A	L	L	D	L
Query Conservation																											.	.
Alig confidence																											.	.																		.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.
Template Sequence		N	A	H	R	V	G	I	T	G	V	P	G	V	G	K	S	T	A	I	E	A	L	G	M	H	L	I	E	R	G	H	R	V	A	V	L	A	V	R	M	A	R	L	A	.	.	.	.	.	.	.	V	H	P	N	A	Y	I	R	P	S	T	L	G	G	V	T	R	A	T	R	E	T	V	V	L	L	E	A	A
Template Known Secondary structure			S									T	T	S	S														T	T	T															.	.	.	.	.	.	.	T	S	T	T																									T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100								.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	N	L	D	K	G	N	I	Q	F	D	R	L	V	I	E	C	T	G	M	A	D	P	G	P	I	I	Q	T	F	F	S	H	E	V	L	C	Q	R	Y	L	L	D	G	V	I	A	L	V	D	A	V	H	A	D	E	Q	M	N	Q	F	T	I	A	Q	S	Q	V	G	Y	A	D	R	I	L	L	T	K	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.									.	.	.	.	.	.																								.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.									.	.	.	.	.	.																								.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	G	F	D	V	I	L	I	E	T	G	Q	.	.	.	.	.	.	.	.	S	E	V	A	V	A	N	M	.	.	.	.	.	.	V	D	T	F	V	L	L	T	L	A	R	T	G	D	Q	L	Q	G	I	K	K	G	V	.	.	.	L	E	L	A	D	I	V	V	V	N	K	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	T											.	.	.	.	.	.	.	.							T	T	.	.	.	.	.	.		S								S		T	T	T	T	T	T	T			T	T	G	.	.	.	G	G	G		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.									.	.	.	.	.	.																								.	.	.
Template SS confidence
											150	.	.	.	.	.	.	.	.	.	160									.	.	.	.	.	.	.	.							.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.
		161	.	.	.	.	.	.							.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.														.	.	.	.	.
Query SS confidence									.	.	.	.	.	.														.	.	.	.	.
Query Sequence		D	V	A	G	E	A	E	.	.	.	.	.	.	K	L	H	E	R	L	A	R	I	N	A	R	A	.	.	.	.	.	P	V	Y	T	V	T
Query Conservation									.	.	.	.	.	.														.	.	.	.	.
Alig confidence									.	.	.	.	.	.														.	.	.	.	.
Template Conservation
Template Sequence		D	G	E	H	H	K	E	A	R	L	A	A	R	E	L	S	A	A	I	R	L	I	Y	P	R	E	A	L	W	R	P	P	V	L	T	M	S
Template Known Secondary structure			G	G	G																			S	T	T		S	S									B
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions