Return to main results Retrieve Phyre Job Id

Job DescriptionP24203
Confidence96.33%DateThu Jan 5 11:41:12 GMT 2012
Rank196Aligned Residues91
% Identity7%Templatec3io5B_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:recombination and repair protein; PDBTitle: crystal structure of a dimeric form of the uvsx recombinase core2 domain from enterobacteria phage t4
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20........ .30.........40.........50.........60.........70.........80...
Predicted Secondary structure 







..


















Query SS confidence 






















. .






















































Query Sequence  VTLLTGFLGAGKTTLLRHILNEQ. . HGYKIAVIENEFGEVSVDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLLDN
Query Conservation 
 













  

   ..     


 

 
   

   
        

  




         
  
   
Alig confidence 






















..















.














....


















Template Conservation 

 
 
 
 







        
       
 
 
   .      





  
....
   
   
     
  
 
Template Sequence  LLILAGPSKSFKSNFGLTMVSSYMRQYPDAVCLFYDSEFGI. TPAYLRSMGVDPERV. . . . IHTPVQSLEQLRIDMVNQL
Template Known Secondary structure  SSSS
TT
SS


.
TT

GGG....
SB
Template Predicted Secondary structure 













.



....







Template SS confidence 















































































   55....60.........70.........80.........90..... ....100.........110 .........120.........
 
   84.....90.........100.
Predicted Secondary structure 












Query SS confidence 

















Query Sequence  LDKGNIQFDRLVIECTGM
Query Conservation          
 



 

 
Alig confidence 

















Template Conservation    

 
   






  
Template Sequence  DAIERGEKVVVFIDSLGN
Template Known Secondary structure  T

TT


STT
Template Predicted Secondary structure 




Template SS confidence 

















   130.........140.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions