Job Description P24203 Confidence 99.00% Date Thu Jan 5 11:41:12 GMT 2012 Rank 22 Aligned Residues 169 % Identity 14% Template c3b9qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana Resolution 1.75 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																									.	.												.	.	.
Query SS confidence																									.	.												.	.	.
Query Sequence		V	T	L	L	T	G	F	L	G	A	G	K	T	T	L	L	R	H	I	L	N	E	Q	.	.	H	G	Y	K	I	A	V	I	E	N	E	.	.	.	F	G	E	V	S	V	D	D	Q	L	I	G	D	R	A	T	Q	I	K	T	L	T	N	G	C	I	C	C	S	R	S	N	E	L	E	D	A	L	L	D	L
Query Conservation																									.	.												.	.	.
Alig confidence																									.	.												.	.	.																									.	.	.	.
Template Conservation																																																																	.	.	.	.
Template Sequence		V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	K	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V	V	A	E	K	A	.	.	.	.	K	A	A	T	V	L	S	K	A	V	K	R	G
Template Known Secondary structure									T	T	S																T	T											S																T										.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.	.	.	.	.	.	.	240	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.
Query SS confidence																													.	.	.	.
Query Sequence		L	D	N	L	D	K	G	N	I	Q	F	D	R	L	V	I	E	C	T	G	M	A	D	P	G	P	I	.	.	.	.	I	Q	T	F	F	S	H	E	V	L	C	Q	R	Y	L	L	D	G	V	I	A	L	V	D	A	V	H	A	D	E	Q	M	N	Q	F	T	I	A	Q	S	Q	V	G	Y	A	D	R	I	L
Query Conservation																													.	.	.	.
Alig confidence					.	.	.	.	.	.																			.	.	.	.																																													.
Template Conservation					.	.	.	.	.	.																																																																			.
Template Sequence		K	E	E	.	.	.	.	.	.	G	Y	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D	G	N	T	G	L	N	M	L	P	Q	A	R	E	F	N	E	V	V	G	I	.	T	G	L	I
Template Known Secondary structure				T	.	.	.	.	.	.	T		S										S	S																		T	T	S	T	T			S								G	G	G	G	G	G	G											T			.
Template Predicted Secondary structure					.	.	.	.	.	.																																																																			.
Template SS confidence
		244	.	.							.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	K	T	D	V	A	G	E	A	E	K	L	H	E	R	L	A	R	I	N	A	R	A	P	V	Y	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	K	L	D	G	S	A	R	G	G	C	V	V	S	V	V	E	E	L	G	I	P	V	K	F	I	G	V
Template Known Secondary structure						S	S		S		T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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