Job Description P24203 Confidence 96.81% Date Thu Jan 5 11:41:12 GMT 2012 Rank 142 Aligned Residues 122 % Identity 16% Template c2xtnA_ PDB info PDB header:immune system Chain: A: PDB Molecule:gtpase imap family member 2; PDBTitle: crystal structure of gtp-bound human gimap2, amino acid2 residues 1-234 Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	L	T	G	F	L	G	A	G	K	T	T	L	L	R	H	I	L	N	E	Q	H	G	Y	K	I	A	V	I	E	N	E	F	G	E	V	S	V	D	D	Q	L	I	G	D	R	A	T	Q	I	K	T	L	T	N	G	C	I	C	C	S	R	S	N	E	L	E	D	A	L	L	D	L	L	D	N	L	D	K
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	L	V	G	K	T	G	T	G	K	S	A	A	G	N	S	I	L	R	.	.	.	.	.	.	.	.	.	.	.	K	Q	A	F	E	S	K	L	G	S	Q	T	L	T	K	T	C	S	K	S	Q	G	S	W	G	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						S	S	T	T	S	S										T	.	.	.	.	.	.	.	.	.	.	.	S			S						S	S					S									T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.												.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.						.	.	.	.
Predicted Secondary structure																				.	.	.	.																																																		.	.	.	.	.
Query SS confidence																				.	.	.	.																																																		.	.	.	.	.
Query Sequence		G	N	I	Q	F	D	R	L	V	I	E	C	T	G	M	A	D	P	.	.	.	.	G	P	I	I	Q	T	F	F	S	H	E	V	L	C	Q	R	Y	L	L	D	G	V	I	A	L	V	D	A	V	H	A	D	E	Q	M	N	Q	F	T	I	A	Q	S	Q	V	G	Y	A	D	.	.	.	.	.	R	I	L	L
Query Conservation																				.	.	.	.																																																		.	.	.	.	.
Alig confidence		.	.	.	.	.														.	.	.	.										.																																								.	.	.	.	.
Template Conservation		.	.	.	.	.																											.
Template Sequence		.	.	.	.	.	E	I	V	I	I	D	T	P	D	M	F	S	W	K	D	H	C	E	A	L	Y	K	E	V	Q	R	.	C	Y	L	L	S	A	P	G	P	H	V	L	L	L	V	T	Q	L	G	R	Y	T	S	Q	D	Q	Q	A	A	Q	R	V	K	E	I	F	G	E	D	A	M	G	H	T	I	V	L	F
Template Known Secondary structure		.	.	.	.	.									S	T	T	S	S	S				T	T								.						T	T			S								T	T																			T	T	G	G	G	G
Template Predicted Secondary structure		.	.	.	.	.																											.
Template SS confidence
							72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	T	D	V	A	G	E	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	H	K	E	D	L	G	S	L	M
Template Known Secondary structure				G	G	G
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions