Job Description P24203 Confidence 98.26% Date Thu Jan 5 11:41:12 GMT 2012 Rank 38 Aligned Residues 137 % Identity 20% Template c2qptA_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:eh domain-containing protein-2; PDBTitle: crystal structure of an ehd atpase involved in membrane remodelling Resolution 3.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.											.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	P	I	A	V	T	L	L	T	G	F	L	G	A	G	K	T	T	L	L	R	H	I	L	N	E	Q	H	G	Y	.	.	.	.	.	.	.	.	.	.	K	I	A	V	I	E	N	E	F	G	E	V	S	V	D	D	Q	L	I	G	D	R	A	T	Q	I	K	T	L	T	N	G	C	I	C	C	S	R	S
Query Conservation																																	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.
Template Sequence		F	D	G	K	P	M	V	L	V	A	G	Q	Y	S	T	G	K	T	S	F	I	Q	Y	L	L	E	Q	E	V	P	G	S	R	V	G	P	E	P	T	T	D	C	F	V	A	V	M	H	G	E	T	E	G	T	V	P	G	N	.	.	.	.	.	.	.	.	.	.	T	F	L	N	R	F	M	C	A	Q	L	P
Template Known Secondary structure		T	S	S									B	T	T	S											T	S			S	S					S	S					S								S	S	S							.	.	.	.	.	.	.	.	.	.				T	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.											.	.	.	.	.	.	.	120	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.
Query SS confidence																																.	.	.	.
Query Sequence		N	E	L	E	D	A	L	L	D	L	L	D	N	L	D	K	G	N	I	Q	F	D	R	L	V	I	E	C	T	G	.	.	.	.	M	A	D	P	G	P	I	I	Q	T	F	F	S	H	E	V	L	C	Q	R	Y	L	L	D	G	V	I	A	L	V	D	A	V	H	A	D	E	Q	M	N	Q	F	T	I	A	Q
Query Conservation																																.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.															.	.	.	.	.	.	.	.																								.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.																								.
Template Sequence		N	Q	V	L	E	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	I	D	T	P	G	I	L	S	R	G	Y	D	F	P	A	V	L	R	W	F	A	E	R	.	.	.	.	.	.	.	.	V	D	L	I	I	L	L	F	D	A	H	K	L	E	I	S	D	E	F	S	E	A	I	.
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								B					S													.	.	.	.	.	.	.	.		S								T	T	S												.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.																								.
Template SS confidence
		143	.	.	.	.	.	.																	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.									.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		147	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		S	Q	V	G	Y	A	D	.	.	.	R	I	L	L	T	K	T	D	V	A	G	E	A	E	K	L	H	E	R
Query Conservation									.	.	.
Alig confidence									.	.	.
Template Conservation
Template Sequence		G	A	L	R	G	H	E	D	K	I	R	V	V	L	N	K	A	D	M	V	E	T	Q	Q	L	M	R	V	Y
Template Known Secondary structure				T	T	T		G	G	G								G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions