Job Description P24203 Confidence 96.78% Date Thu Jan 5 11:41:12 GMT 2012 Rank 143 Aligned Residues 146 % Identity 18% Template c1udxA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:the gtp-binding protein obg; PDBTitle: crystal structure of the conserved protein tt1381 from thermus2 thermophilus hb8 Resolution 2.07 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	P	I	A	V	T	L	L	T	G	F	L	G	A	G	K	T	T	L	L	R	H	I	L	N	E	Q	H	G	Y	K	I	A	V	I	E	N	E	F	G	E	V	S	V	D	D	Q	L	I	G	D	R	A	T	Q	I	K	T	L	T	N	G	C	I	C	C	S	R	S	N	E	L	E	D	A	L	L	D	L
Query Conservation
Alig confidence																															.	.	.	.	.											.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.											.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	M	L	I	A	D	V	G	L	V	G	Y	P	N	A	G	K	S	S	L	L	A	A	M	T	R	A	H	P	.	.	.	.	.	K	I	A	P	Y	P	F	T	T	L	.	.	.	.	.	.	.	S	P	N	L	G	V	V	E	V	S	E	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S		S							G	G	G											S	S			.	.	.	.	.						T	T		S	S	.	.	.	.	.	.	.										S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.	.	.											.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.						.	.	.	.	.	.	.	190	.	.								.	.	.	.	.	.	.	200	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.					.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																								.	.												.	.	.	.
Query SS confidence																																																								.	.												.	.	.	.
Query Sequence		L	D	N	L	D	K	G	N	I	Q	F	D	R	L	V	I	E	C	T	G	M	A	D	P	G	P	I	I	Q	T	F	F	S	H	E	V	L	C	Q	R	Y	L	L	D	G	V	I	A	L	V	D	A	V	H	.	.	A	D	E	Q	M	N	Q	F	T	I	A	.	.	.	.	Q	S	Q	V	G	Y	A	D	R
Query Conservation																																																								.	.												.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																					.																							.	.												.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	R	F	T	L	A	D	I	P	G	I	I	E	G	A	S	E	G	K	G	L	.	G	L	E	F	L	R	H	I	A	R	T	R	V	L	L	Y	V	L	D	A	A	D	E	P	L	K	T	L	E	T	L	R	K	E	V	G	A	Y	D	P	A	L	L	R	R	P	S	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.														G	G	G	S			S	.									T	S	S	S								T	T	S																							S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
													206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	L	T	K	T	D	V	A	G	E	A	E	K	L	H	E	R	L	A	R	I	N	A	R	A	P	V	Y	T	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	L	N	K	V	D	L	L	E	E	E	A	V	K	A	L	A	D	A	L	A	R	E	G	L	A	V	L	P	V	S
Template Known Secondary structure								T	T	S														T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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