Job Description P24203 Confidence 97.34% Date Thu Jan 5 11:41:12 GMT 2012 Rank 80 Aligned Residues 157 % Identity 24% Template c1skqB_ PDB info PDB header:translation Chain: B: PDB Molecule:elongation factor 1-alpha; PDBTitle: the crystal structure of sulfolobus solfataricus elongation2 factor 1-alpha in complex with magnesium and gdp Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	I	A	V	T	L	L	T	G	F	L	G	A	G	K	T	T	L	L	R	H	I	L	N	E	Q	H	G	Y	K	I	A	V	I	E	N	E	F	G	E	V	S	V	D	D	Q	L	I	G	D	R	A	T	Q	I	K	T	L	T	N	G	C	I	C	C	S	R	S	N	E	L	E	D	A	L	L	D	L	L
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Sequence		K	P	H	L	N	L	I	V	I	G	H	V	D	H	G	K	S	T	L	V	G	R	L	L	M	D	R	G	F	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	K	T	V	K	E	A	E	E	A	A	K	K	L	G	.	.	.	.	.	.	K	E	S	E	K	F	A	F	L	L	D	R	L	K
Template Known Secondary structure												S	T	T	S	S													B			.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S												T	T	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.															.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.							50	.	.	.	.	.	.	.	.	.	60	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.									.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.
Query Sequence		D	N	L	D	K	G	N	I	Q	F	D	R	L	V	I	E	C	T	G	M	A	D	P	G	P	I	I	Q	T	F	F	S	H	E	V	L	C	Q	R	Y	L	L	D	G	V	I	A	L	V	D	A	V	H	A	.	.	.	.	.	.	.	.	D	E	Q	M	N	Q	F	T	I	A	Q	S	Q	V	G	Y	A	D
Query Conservation																																																								.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.
Template Sequence		E	E	M	R	F	E	T	K	K	Y	F	F	T	I	I	D	A	P	G	H	R	D	F	V	K	N	M	I	T	G	A	S	Q	.	.	.	.	.	.	.	.	A	D	A	A	I	L	V	V	S	A	K	K	G	E	Y	E	A	G	M	S	V	E	G	Q	T	R	E	H	I	I	L	A	K	T	M	G	L	D	Q
Template Known Secondary structure		T							S	S									T	T	S	T	T								S	S	S		.	.	.	.	.	.	.	.		S									S	T	T						S	S	S	S													T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.									.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		154	.	.		.	.	.	160	.	.	.	.	.											.	.	.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.
Predicted Secondary structure					.										.	.	.	.	.	.	.	.	.	.													.	.	.
Query SS confidence					.										.	.	.	.	.	.	.	.	.	.													.	.	.
Query Sequence		R	I	L	.	L	T	K	T	D	V	A	G	E	.	.	.	.	.	.	.	.	.	.	A	E	K	L	H	E	R	L	A	R	I	N	.	.	.	A	R	A	P	V	Y	T	V	T
Query Conservation					.										.	.	.	.	.	.	.	.	.	.													.	.	.
Alig confidence					.										.	.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation
Template Sequence		L	I	V	A	V	N	K	M	D	L	T	E	P	P	Y	D	E	K	R	Y	K	E	I	V	D	Q	V	S	K	F	M	R	S	Y	G	F	N	T	N	K	V	R	F	V	P	V	V
Template Known Secondary structure									G	G	G	S	S	S	T	T																			T	T				T	T							B
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions