Job Description P24203 Confidence 98.02% Date Thu Jan 5 11:41:12 GMT 2012 Rank 41 Aligned Residues 170 % Identity 14% Template c1j8yF_ PDB info PDB header:signaling protein Chain: F: PDB Molecule:signal recognition 54 kda protein; PDBTitle: signal recognition particle conserved gtpase domain from a.2 ambivalens t112a mutant Resolution 2.00 Å

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		2	.	.	.		.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure						.																							.	.													.	.	.
Query SS confidence						.																							.	.													.	.	.
Query Sequence		N	P	I	A	.	V	T	L	L	T	G	F	L	G	A	G	K	T	T	L	L	R	H	I	L	N	E	.	.	Q	H	G	Y	K	I	A	V	I	E	N	E	.	.	.	F	G	E	V	S	V	D	D	Q	L	I	G	D	R	A	T	Q	I	K	T	L	T	N	G	C	I	C	C	S	R	S	N	E	L	E	D
Query Conservation						.																							.	.													.	.	.
Alig confidence						.										.	.	.			.								.	.													.	.	.																						.	.	.	.	.	.	.
Template Conservation																.	.	.			.																																														.	.	.	.	.	.	.
Template Sequence		D	K	I	P	Y	V	I	M	L	V	G	V	Q	G	.	.	.	T	T	.	A	G	K	L	A	Y	F	Y	K	K	K	G	F	K	V	G	L	V	G	A	D	V	Y	R	P	A	A	L	E	Q	L	Q	Q	L	G	Q	Q	I	G	V	P	V	Y	G	E	.	.	.	.	.	.	.	P	G	E	K	D	V	V	G
Template Known Secondary structure		S	S	S	S								S			.	.	.			.											T	T											S	S															T							.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																.	.	.			.																																														.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.								.	.	.	.	160	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	D	L	L	D	N	L	D	K	G	N	I	Q	F	D	R	L	V	I	E	C	T	G	M	A	D	P	G	P	I	I	Q	T	F	F	S	H	E	V	L	C	Q	R	Y	L	L	D	G	V	I	A	L	V	D	A	V	H	A	D	E	Q	M	N	Q	F	T	I	A	Q	S	Q	V	G	Y	A	D	R	I
Query Conservation
Alig confidence											.	.																																																																		.
Template Conservation											.	.																																																																		.
Template Sequence		I	A	K	R	G	V	E	K	F	.	.	L	S	E	K	M	E	I	I	I	V	D	T	A	G	R	H	G	Y	G	E	E	A	A	L	L	E	E	M	K	N	I	Y	E	A	I	K	P	D	E	V	T	L	V	I	D	A	S	I	G	Q	K	A	Y	D	L	A	S	K	F	N	Q	A	S	K	I	.	G	T	I
Template Known Secondary structure											.	.			T	T		S									S			T	T																			S								G	G	G	G	G	G													T	T	.
Template Predicted Secondary structure											.	.																																																																		.
Template SS confidence
		168	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	T	K	T	D	V	A	G	E	A	E	K	L	H	E	R	L	A	R	I	N	A	R	A	P	V	Y	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	T	K	M	D	G	T	A	K	G	G	G	A	L	S	A	V	A	A	T	G	A	T	I	K	F	I	G	T
Template Known Secondary structure						T	T	S		S											T	T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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