Job Description P24203 Confidence 97.62% Date Thu Jan 5 11:41:12 GMT 2012 Rank 56 Aligned Residues 127 % Identity 20% Template c1g7tA_ PDB info PDB header:translation Chain: A: PDB Molecule:translation initiation factor if2/eif5b; PDBTitle: x-ray structure of translation initiation factor if2/eif5b2 complexed with gdpnp Resolution 2.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	T	L	L	T	G	F	L	G	A	G	K	T	T	L	L	R	H	I	L	N	E	Q	H	G	Y	K	I	A	V	I	E	N	E	F	G	E	V	S	V	D	D	Q	L	I	G	D	R	A	T	Q	I	K	T	L	T	N	G	C	I	C	C	S	R	S	N	E	L	E	D	A	L	L	D	L	L	D	N	L
Query Conservation
Alig confidence																														.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	I	V	S	V	L	G	H	V	D	H	G	K	T	T	L	L	D	H	I	R	G	S	A	V	A	S	R	.	.	.	I	T	Q	H	I	G	A	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	M	D	V	I	E	G	I	C	G	D	F	L	K	K	F
Template Known Secondary structure									S	T	T	S	S														T	T		.	.	.					T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S		G	G	G	T	T
Template Predicted Secondary structure																														.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.																								.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		D	K	G	N	I	Q	F	D	R	L	V	I	E	C	T	G	M	A	D	P	G	P	I	I	Q	T	F	F	S	H	E	V	L	C	Q	R	Y	L	L	D	G	V	I	A	L	V	D	A	V	H	A	D	E	Q	M	N	Q	F	T	I	.	A	Q	S	Q	V	G	Y	A	D	R	I	L	L	T	K	T	D	V	A
Query Conservation																																																														.
Alig confidence																					.	.	.	.	.	.	.	.																																		.
Template Conservation																					.	.	.	.	.	.	.	.
Template Sequence		S	I	R	E	T	L	P	G	L	F	F	I	D	T	P	G	H	E	A	.	.	.	.	.	.	.	.	F	T	T	L	R	K	R	G	G	A	L	A	D	L	A	I	L	I	V	D	I	N	E	G	F	K	P	Q	T	Q	E	A	L	N	I	L	R	M	Y	R	T	P	F	V	V	A	A	N	K	I	D	R	I
Template Known Secondary structure		G	G	G	G	T											T	T	T		.	.	.	.	.	.	.	.	G	G	G	S			T	T			S		S								T	T	T																T	T										G	G	G	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.									.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		164	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	G
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		136	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions