Job Description P77766 Confidence 99.80% Date Thu Jan 5 12:32:40 GMT 2012 Rank 14 Aligned Residues 187 % Identity 18% Template c3f2cA_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:geobacillus kaustophilus dna polc; PDBTitle: dna polymerase polc from geobacillus kaustophilus complex with dna,2 dgtp and mn Resolution 2.50 Å

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		10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		Y	D	L	H	S	H	T	T	A	S	.	.	D	G	C	L	T	P	E	A	L	V	H	R	A	V	E	M	R	V	G	T	L	A	I	T	D	H	D	T	T	A	A	I	A	P	A	R	E	E	I	S	R	S	G	L	A	L	N	L	I	P	G	V	E	I	S	T	V	W	E	N	H	E	I	H	I	V	G	L
Query Conservation												.	.
Alig confidence												.	.																																												.	.
Template Conservation																																																									.	.
Template Sequence		V	E	L	H	L	H	T	P	M	S	Q	M	D	A	V	T	S	V	T	K	L	I	E	Q	A	K	K	W	G	H	P	A	I	A	V	T	D	H	A	V	V	Q	S	F	P	E	A	Y	S	A	A	K	K	H	G	.	.	M	K	V	I	Y	G	L	E	A	N	I	V	D	D	P	F	H	V	T	L	L	A	Q
Template Known Secondary structure			B		S	B			T	T	S	T	T	T			S													T		S							B	S			T	T												T	.	.
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.			.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	D	I	T	H	P	L	M	C	E	F	L	A	Q	Q	T	E	R	R	N	Q	R	A	Q	L	I	A	E	R	L	E	K	A	Q	I	P	G	A	L	E	G	A	Q	R	L	A	Q	G	G	A	V	T	R	G	H	F	A	R	F	L	V	E	C	G	K	A	S	S	M	A	D	V	F	K	K	Y	L	A	R
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	L	K	N	L	F	K	L	V	S	L	S	H	I	Q	Y	F	H	R	V	P	R	I	P	R	S	V	L	V	K	H	R	.	.	.	.	.	.	.	.	.	.	.	.	.	D
Template Known Secondary structure		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T	T		S	S	S											T		.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		627	.																																.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.														.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	T	G	Y	V	P	P	Q	W	C	T	I	E	Q	A	I	D	V	I	H	H	S	G	G	K	A	V	L	A	H	P	G	R	Y	N	L	S	A	K	W	L	K	R	L	V	A	H	F	A	E	H	H	G	D	A	M	E	V	A	Q	C	Q	Q	S	P	N	E	R	T	Q	L	A	A	L	A	R	Q	H	H
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	L	V	G	S	G	C	D	K	G	E	L	F	D	N	V	E	D	I	A	R	F	Y	D	F	L	E	V	H	P	P	D	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	L	V	K	D	E	E	M	I	K	N	I	I	R	S	I	V	A	L	G	E	K	L	D
Template Known Secondary structure		T							S	T	T	B	T	T	T	T								T		S	B						G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		663	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.																					.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	A	S	Q	G	S	D	F	H	Q	P	C	P	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	V	V	A	T	G	N	V	H	Y	L	N	P	E
Template Known Secondary structure										B	S	B	S	S	G	G
Template Predicted Secondary structure
Template SS confidence
		736	.	.	.	740	.	.	.	.	.	.	.	.	.	750

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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