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Job DescriptionP77766
Confidence100.00%DateThu Jan 5 12:32:40 GMT 2012
Rank1Aligned Residues272
% Identity40%Templatec2yb1A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:amidohydrolase; PDBTitle: structure of an amidohydrolase from chromobacterium violaceum (efi2 target efi-500202) with bound mn, amp and phosphate.
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  YDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITDHDTTAAIAPAREEISRSGLALNLIPGVEISTVWENHEIHIVGLNI
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Template Sequence  IDLHFHSRTSDGALTPTEVIDRAAARAPALLALTDHDCTGGLAEAAAAAARRG. . IPFLNGVEVSVSWGRHTVHIVGLGI
Template Known Secondary structure 

B

TTTT
SS
TT

S

BT

TTTT..

TTS
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Query Sequence  DITHPLMCEFLAQQTERRNQRAQLIAERLEKAQIPGALEGAQRLAQG. GAVTRGHFARFLVECGKASSMADVFKKYLARG
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Template Sequence  DPAEPALAAGLKSIREGRLERARQMGASLEAAGIAGCFDGAMRWCDNPEMISRTHFARHLVDSGAVKDMRTVFRKYLTPG
Template Known Secondary structure 
TT
TTTT
TTTT
SSGGG

TTSSSSSSSTT
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
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Query Sequence  KTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRLVAHFAEHHGDAMEVAQCQQSPNERTQLAALARQHHL
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Template Sequence  KPGYVSHQWASLEDAVGWIVGAGGMAVIAHPGRYDMGRTLIERLILDFQAAGGQGIEVASGSHSLDDMHKFALHADRHGL
Template Known Secondary structure  STT





B
TT


GGGSS

TT

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T
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
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Query Sequence  WASQGSDFHQPCPWIELGRKLWLPAGVEGVWQLWEQP
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Template Sequence  YASSGSDFHAPG. . EDVGHTEDLPPICRPIWRELEAR
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STT..

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TT

BSGGG
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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