Job Description P77766 Confidence 99.92% Date Thu Jan 5 12:32:40 GMT 2012 Rank 5 Aligned Residues 180 % Identity 19% Template c2w9mB_ PDB info PDB header:dna replication Chain: B: PDB Molecule:polymerase x; PDBTitle: structure of family x dna polymerase from deinococcus2 radiodurans Resolution 2.46 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.											.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	H	S	H	T	T	A	S	D	G	C	L	T	P	E	A	L	V	H	R	A	V	E	M	R	V	G	T	L	A	I	T	D	H	D	T	T	A	A	I	A	P	.	.	.	.	.	.	.	.	.	.	A	R	E	E	I	S	R	S	G	L	A	L	N	L	I	P	G	V	E	I	S	T	V	W	E	N	H
Query Conservation																																													.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																																																																																.	.
Template Sequence		M	I	H	T	H	S	T	W	S	D	G	G	A	S	I	R	E	M	A	E	A	T	L	T	L	G	H	E	F	L	G	T	A	D	H	S	R	A	A	Y	Y	A	N	G	L	T	I	E	R	L	R	E	Q	L	K	E	I	R	E	L	Q	R	A	G	L	P	I	V	A	G	S	E	V	D	I	L	D	D	.	.
Template Known Secondary structure								T	T	T	T		S	S												T	T		S								B	T	T		G	G	G	T		B																		T	T											B		T	T	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	H	I	V	G	L	N	I	D	I	T	H	P	L	M	C	E	F	L	A	Q	Q	T	E	R	R	N	Q	R	A	Q	L	I	A	E	R	L	E	K	A	Q	I	P	G	A	L	E	G	A	Q	R	L	A	Q	G	G	A	V	T	R	G	H	F	A	R	F	L	V	E	C	G	K	A	S	S	M	A	D	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.										.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.										.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	L	D	F	P	D	D	V	L	G	E	.	L	D	Y	V	V	V	S	V	H	.	.	.	.	.	.	.	S	N	F	T	L	D	A	A	R	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		B	S	S						T	T	.	S	S								.	.	.	.	.	.	.	S		T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.										.	.	.	.	.	.	.
Template SS confidence
																																											408	.	410	.	.	.	.	.	.	.	.	.		420	.	.	.	.	.	.	.	.								.	430	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200						.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.
Query SS confidence																																										.	.	.	.	.
Query Sequence		F	K	K	Y	L	A	R	G	K	T	G	Y	V	P	P	Q	W	C	T	I	E	Q	A	I	D	V	I	H	H	S	G	G	K	A	V	L	A	H	P	G	.	.	.	.	.	R	Y	N	L	S	A	K	W	L	K	R	L	V	A	H	F	A	E	H	H	G	D	A	M	E	V	A	Q	C	Q	Q	S	P	N	E
Query Conservation																																										.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.																						.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Template Sequence		T	E	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	A	V	S	H	P	L	V	T	V	L	G	H	A	T	G	R	L	L	L	R	R	P	G	Y	A	L	D	L	D	A	V	L	G	A	C	E	A	N	G	T	.	V	V	E	I	N	A	N	A	A	R	L	D	L
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T		S	S						S	T	T			B	T	T	T	B																		T		.							S	T	T	T		B	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Template SS confidence
		439	440	.	.																					.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.		.	.	.	.	.	490	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	Q	L	A	A	L	A	R	Q	H	H	L	W	A	S	Q	G	S	D	F	H	Q	P	C	P	W	I	E	L	G
Query Conservation
Alig confidence												.															.	.	.
Template Conservation												.															.	.	.
Template Sequence		D	W	R	E	A	L	R	W	R	E	.	R	L	K	F	A	I	N	T	D	A	H	V	P	G	.	.	.	G	L	R
Template Known Secondary structure										T	T	.	T										S	S	G	G	.	.	.	G	G	G
Template Predicted Secondary structure												.															.	.	.
Template SS confidence
		498	.	500	.	.	.	.	.	.	.		.	.	510	.	.	.	.	.	.	.	.	.	520	.				.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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