 |
Job Description | P52129 | Confidence | 10.21% | Date | Thu Jan 5 12:05:34 GMT 2012 |
Rank | 29 | Aligned Residues | 31 |
% Identity | 26% | Template | d2bbya_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| DNA-binding domain from rap30
|
Resolution | UNK |
|
  |   |
258 | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | G | V | L | K | S | K | M | S | G | L | G | M | P | V | Q | Q | P | A | G | F | G | T | Y | F | D | K | P | A | A | H | Y | I | L | K | P | Q | F | A |
Query Conservation |   |
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |
|   |
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|   |
|
|
|   |   |   |
|   |
| . | . | . | . | . | . | . | . |   |   |   |   |   |
|
|
|
|
|
|
|
|
Template Sequence |   |
V | V | Y | L | K | E | I | L | K | E | I | G | V | Q | N | V | K | G | . |
. |
. |
. |
. |
. |
. |
. |
I | H | K | N | T | W | E | L | K | P | E | Y | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
|
| T | . | . | . | . | . | . | . | . | T |
|
|
|  |  |
|
|
|
| S | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | 230 | . | . | . | . | . | . | . | . | . | 240 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|