 |
Job Description | P52129 | Confidence | 5.09% | Date | Thu Jan 5 12:05:34 GMT 2012 |
Rank | 57 | Aligned Residues | 121 |
% Identity | 12% | Template | c2hsbA_ |
PDB info |
PDB header:unknown function | Chain: A: PDB Molecule:hypothetical upf0332 protein af0298; |
PDBTitle: crystal structure of a hepn domain containing protein (af_0298) from2 archaeoglobus fulgidus at 1.95 a resolution
|
Resolution | 1.95 Å |
|
 |
  |   |
205 | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | V | A | R | T | Y | L | Q | T | V | M | A | D | A | Y | P | H | L | H | V | T | A | E | K | L | L | V | S | G | L | C | V | K | L | A | A | P | D | L | P | D | Y | C | M | L | L | Y | P | E | L | R | T | I | E | G | V | L | K | S | K | M | S | G | L | G | M | P | V | Q | Q | P | A | G | F | G | T | Y | F | D | K |
Query Conservation |   |
|
|
|
|   |   |
|
|
|   |   |   |   |
|
|
|   |
|   |   |   |   |
|
|   |
|   |
|
|   |
|   |   |
|   |   |   |   |
|
|
|
|
|   |
|
|   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |
|   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|   |   |   |   | . | . | . | . |   |   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |
|   |
|   |
|
|
|
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
Template Sequence |   |
D | E | L | E | L | R | I | R | K | A | E | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | V | Q | D | A | K | K | E | F | . |
. |
. |
. |
E | X | G | L | Y | E | R | C | C | S | T | A | Y | Y | A | X | F | H | A | A | K | A | X | L | L | G | Y | G | R | D | S | K | T | H | R | G | T | I | Y | L | I | W | E |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | . | . | . | . |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | . | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 20 | . | . | |
|
|
|
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . |
  |
  |   |
285 | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | A | A | H | Y | I | L | K | P | Q | F | A | A | T | L | R | P | E | Q | I | N | I | I | S | T | A | Y | T | F | F | N | V | E | R | H | S | L | F | H | M | E | T | V | V | D | A | S | R | M | I | S | D | M | A | R | L | M | G | K | A | T | R | A | W | G |
Query Conservation |   |
  |   |   |   |
|   |
|
|   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |   |   |
|
|   |
|
|   |   |
|
|   |
|
|
|
|   |   |   |   |   |   |
|
|   |
|   |   |
|   |
|
|   |   |
|
|   |   |   |
|   |
Alig confidence |   |
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |
|   |
|
|
|
|   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |
Template Sequence |   |
C | R | E | E | . |
. |
. |
. |
. |
. |
. |
. |
L | G | L | S | D | D | D | C | S | K | L | S | R | A | F | D | L | R | E | E | S | D | Y | G | I | Y | K | E | V | S | K | D | L | A | I | K | I | L | K | D | A | E | I | F | V | Q | K | A | K | N | A | V | N |
Template Known Secondary structure |   |
T |  |  |  | . | . | . | . | . | . | . | . |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
66 | . | . | . | |
|
|
|
|
|
|
|
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|