Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADC8
Confidence11.33%DateThu Jan 5 11:20:37 GMT 2012
Rank17Aligned Residues35
% Identity26%Templatec1tjlD_
PDB info PDB header:transcriptionChain: D: PDB Molecule:dnak suppressor protein; PDBTitle: crystal structure of transcription factor dksa from e. coli
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40..... ....50.....
Predicted Secondary structure 









..
Query SS confidence 
































. .









Query Sequence  GQAAKMLIGIPDYDNYVEHMKTNHPDKPYMSYE. . EFFRERQNAR
Query Conservation      
 
 
   

 

 
 
  

   


 
..

 
 
  

Alig confidence 












........











..









Template Conservation               ........     
  
   

  

  
   
Template Sequence  SLSILAIAGVEPY. . . . . . . . QEKPGEEYMNEAQLAHFRRILEAW
Template Known Secondary structure  S
TT



........


TT

TT
Template Predicted Secondary structure 





........









Template SS confidence 












































   11........20... ......30.........40.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions