Job Description P06282 Confidence 12.27% Date Thu Jan 5 10:59:08 GMT 2012 Rank 48 Aligned Residues 25 % Identity 40% Template c3jwdA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:hiv-1 gp120 envelope glycoprotein; PDBTitle: structure of hiv-1 gp120 with gp41-interactive region: layered2 architecture and basis of conformational mobility Resolution 2.61 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		I	V	L	E	E	C	L	P	N	Q	Q	Q	N	Q	N	P	S	P	.	.	.	C	A	E	V	K	P	N	A	G	Y	V	V	L	K
Query Conservation																				.	.	.
Alig confidence									.	.	.									.	.	.			.	.	.	.
Template Conservation									.	.	.														.	.	.	.
Template Sequence		V	I	T	Q	A	C	P	.	.	.	K	V	S	F	E	P	I	P	I	H	Y	C	A	.	.	.	.	P	A	G	F	A	I	L	K
Template Known Secondary structure									.	.	.									B					.	.	.	.		T	T
Template Predicted Secondary structure									.	.	.														.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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