Job Description P06282 Confidence 4.81% Date Thu Jan 5 10:59:08 GMT 2012 Rank 90 Aligned Residues 38 % Identity 13% Template c3b79A_ PDB info PDB header:nucleotide binding protein Chain: A: PDB Molecule:toxin secretion atp-binding protein; PDBTitle: crystal structure of the n-terminal peptidase c39 like2 domain of the toxin secretion atp-binding protein from3 vibrio parahaemolyticus Resolution 1.37 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		L	P	N	Q	Q	Q	N	Q	N	P	S	P	C	A	E	V	K	P	N	A	G	Y	V	V	L	K	D	L	N	.	.	G	P	L	Q	Y	L	L	M	P
Query Conservation																															.	.
Alig confidence																															.	.
Template Conservation
Template Sequence		A	E	L	E	K	I	S	S	L	I	L	P	A	I	L	V	L	K	G	G	D	S	C	V	L	N	S	I	N	X	E	T	R	E	A	E	V	T	T	L
Template Known Secondary structure				G	G	G	S		G	G	G		S						G	G	G										T	T	T	T							T
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions