Return to main results Retrieve Phyre Job Id

Job DescriptionP06282
Confidence95.68%DateThu Jan 5 10:59:08 GMT 2012
Rank7Aligned Residues103
% Identity14%Templatec3anoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ap-4-a phosphorylase; PDBTitle: crystal structure of a novel diadenosine 5',5'''-p1,p4-tetraphosphate2 phosphorylase from mycobacterium tuberculosis h37rv
Resolution1.89 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70. ........80.........90.........100.........110.
Predicted Secondary structure 

























..

















Query SS confidence 





































. .







































Query Sequence  LRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLN. . GPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFM
Query Conservation 

 

  



       
 

  

   






  ..
  
 




 







 

    



  

 

  
Alig confidence 

.


































..

















......















Template Conservation    . 
   
 

 
         



     



  
  











  
 
......
  

   
  
   
Template Sequence  LW. TPYRAQPFTEIPQLSDEEGLVVARGKLVYAVLNLYPYNPGHLMVVPYRRVSELED. . . . . . LTDLESAELMAFTQKA
Template Known Secondary structure 

.





GGGS
T
SS
SS
SSTT
SS



GGG......S
Template Predicted Secondary structure  .






























......

Template SS confidence 















































































   30. ........40.........50.........60.........70.........80...... ...90.........100..
 
   112.......120.........130....... ..140...
Predicted Secondary structure 











...
Query SS confidence 

























. . .





Query Sequence  SKKYGQPVPDRAVSLAINSRTGRTQN. . . HFHIHI
Query Conservation      
  

   






  




...





Alig confidence 

























...





Template Conservation    

       
 

  
 
  

  
  


 

Template Sequence  IRVIKNVSRPHGFNVGLNLGTSAGGSLAEHLHVHV
Template Known Secondary structure 


S


SGGGT
TTTTS

Template Predicted Secondary structure 












Template SS confidence 


































   122.......130.........140.........150......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions