Return to main results Retrieve Phyre Job Id

Job DescriptionP11551
Confidence1.63%DateThu Jan 5 11:32:44 GMT 2012
Rank63Aligned Residues71
% Identity10%Templatec2wwaA_
PDB info PDB header:ribosomeChain: A: PDB Molecule:sec sixty-one protein homolog; PDBTitle: cryo-em structure of idle yeast ssh1 complex bound to the2 yeast 80s ribosome
Resolution8.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60.........70.........80.........
Predicted Secondary structure 














Query SS confidence 












































































Query Sequence  AVDKDAGQSRSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLS
Query Conservation           
             
  
          
       

    
 
 
    
  
     
 
 

 
Alig confidence 





































......
































Template Conservation        

 
    

 


 

 


   
       ......         


 
  

 




 
 

 
 
Template Sequence  NFKIQSDRELFQSLTKVFAIVQYVILTNIFIFAGYFGD. . . . . . DLSVVQIGLINFQLVGAGIFTTLLAEVIDKGFG
Template Known Secondary structure 
TTSTTTTTTTS
......

STTTTTTTTS
Template Predicted Secondary structure 





......






Template SS confidence 












































































   106...110.........120.........130.........140... ......150.........160.........170......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions