Email l.a.kelley@imperial.ac.uk Description P52141 Date Thu Jan 5 12:05:46 GMT 2012 Unique Job ID fd2b7dd1826f5449

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2ea9a1 100.0 100 Fold:Profilin-like Superfamily:YeeU-like Family:YagB/YeeU/YfjZ-like 2 d2h28a1 100.0 64 Fold:Profilin-like Superfamily:YeeU-like Family:YagB/YeeU/YfjZ-like 3 d2inwa1 100.0 65 Fold:Profilin-like Superfamily:YeeU-like Family:YagB/YeeU/YfjZ-like 4 d1ryba_ 58.8 23 Fold:Phosphorylase/hydrolase-like Superfamily:Peptidyl-tRNA hydrolase-like Family:Peptidyl-tRNA hydrolase-like 5 c3h3yF_ 48.6 33 PDB header:viral protein Chain: F: PDB Molecule:baseplate structural protein gp6; PDBTitle: fitting of the gp6 crystal structure into 3d cryo-em2 reconstruction of bacteriophage t4 star-shaped baseplate 6 c2z2jA_ 48.6 17 PDB header:hydrolase Chain: A: PDB Molecule:peptidyl-trna hydrolase; PDBTitle: crystal structure of peptidyl-trna hydrolase from mycobacterium2 tuberculosis 7 c3v2iA_ 31.7 7 PDB header:hydrolase Chain: A: PDB Molecule:peptidyl-trna hydrolase; PDBTitle: structure of a peptidyl-trna hydrolase (pth) from burkholderia2 thailandensis 8 c3neaA_ 31.5 14 PDB header:hydrolase Chain: A: PDB Molecule:peptidyl-trna hydrolase; PDBTitle: crystal structure of peptidyl-trna hydrolase from francisella2 tularensis 9 d2ptha_ 30.0 24 Fold:Phosphorylase/hydrolase-like Superfamily:Peptidyl-tRNA hydrolase-like Family:Peptidyl-tRNA hydrolase-like 10 d2qdya1 21.0 22 Fold:Nitrile hydratase alpha chain Superfamily:Nitrile hydratase alpha chain Family:Nitrile hydratase alpha chain 11 c2yqkA_ 17.9 9 PDB header:transcription/apoptosis Chain: A: PDB Molecule:arginine-glutamic acid dipeptide repeats protein; PDBTitle: solution structure of the sant domain in arginine-glutamic2 acid dipeptide (re) repeats 12 d1lpba2 15.5 71 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Colipase-like Family:Colipase-like 13 d1du0a_ 15.5 29 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 14 c3aqoD_ 15.2 40 PDB header:membrane protein Chain: D: PDB Molecule:probable secdf protein-export membrane protein; PDBTitle: structure and function of a membrane component secdf that enhances2 protein export 15 d1xv2a_ 15.2 27 Fold:AF0104/ALDC/Ptd012-like Superfamily:AF0104/ALDC/Ptd012-like Family:Alpha-acetolactate decarboxylase-like 16 d2e7ga1 12.9 14 Fold:Alpha-lytic protease prodomain-like Superfamily:Ribosome-binding factor A, RbfA Family:Ribosome-binding factor A, RbfA 17 d1s7ea1 11.9 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 18 d1mh3a1 11.8 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 19 d2d81a1 11.8 28 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:PHB depolymerase-like 20 d1le8a_ 10.9 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 21 d1p7jb_ not modelled 10.8 29 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 22 c1a31A_ not modelled 9.9 24 PDB header:isomerase/dna Chain: A: PDB Molecule:protein (topoisomerase i); PDBTitle: human reconstituted dna topoisomerase i in covalent complex2 with a 22 base pair dna duplex 23 d1e3oc1 not modelled 9.7 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 24 c1n8sC_ not modelled 9.5 43 PDB header:hydrolase Chain: C: PDB Molecule:colipase ii; PDBTitle: structure of the pancreatic lipase-colipase complex 25 d1au7a1 not modelled 9.3 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 26 c3a03A_ not modelled 8.5 31 PDB header:gene regulation Chain: A: PDB Molecule:t-cell leukemia homeobox protein 2; PDBTitle: crystal structure of hox11l1 homeodomain 27 c3hruA_ not modelled 8.4 17 PDB header:transcription Chain: A: PDB Molecule:metalloregulator scar; PDBTitle: crystal structure of scar with bound zn2+ 28 d1qcva_ not modelled 8.3 50 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 29 d6rxna_ not modelled 8.3 67 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 30 c2jobA_ not modelled 8.2 12 PDB header:lipid binding protein Chain: A: PDB Molecule:antilipopolysaccharide factor; PDBTitle: solution structure of an antilipopolysaccharide factor from2 shrimp and its possible lipid a binding site 31 d1ijwc_ not modelled 8.2 37 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain 32 d1g3wa2 not modelled 8.1 14 Fold:Iron-dependent repressor protein, dimerization domain Superfamily:Iron-dependent repressor protein, dimerization domain Family:Iron-dependent repressor protein, dimerization domain 33 d2dsxa1 not modelled 8.0 67 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 34 d2rdva_ not modelled 7.6 67 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 35 d1f43a_ not modelled 7.6 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 36 d1h7va_ not modelled 7.5 67 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 37 d2hrkb1 not modelled 7.5 19 Fold:GST C-terminal domain-like Superfamily:GST C-terminal domain-like Family:Arc1p N-terminal domain-like 38 d1brfa_ not modelled 7.4 67 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 39 d1yz8p1 not modelled 7.3 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 40 d1rb9a_ not modelled 7.2 67 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 41 d1iu5a_ not modelled 7.2 67 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 42 d1p7ia_ not modelled 7.2 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 43 d1lfba_ not modelled 7.1 21 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 44 d1sana_ not modelled 7.1 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 45 d1s24a_ not modelled 7.1 50 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 46 c1s24A_ not modelled 7.1 50 PDB header:electron transport Chain: A: PDB Molecule:rubredoxin 2; PDBTitle: rubredoxin domain ii from pseudomonas oleovorans 47 d1iroa_ not modelled 7.0 67 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 48 d1zl8a1 not modelled 7.0 25 Fold:L27 domain Superfamily:L27 domain Family:L27 domain 49 d1x93a1 not modelled 7.0 50 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:CopG-like 50 c1x93B_ not modelled 7.0 50 PDB header:transcription Chain: B: PDB Molecule:hypothetical protein hp0222; PDBTitle: nmr structure of helicobacter pylori hp0222 51 c2lcgA_ not modelled 6.9 7 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of protein rmet_5065 from ralstonia2 metallidurans, northeast structural genomics consortium target crr115 52 c3fhkF_ not modelled 6.8 22 PDB header:structural genomics, unknown function Chain: F: PDB Molecule:upf0403 protein yphp; PDBTitle: crystal structure of apc1446, b.subtilis yphp disulfide2 isomerase 53 d1ocpa_ not modelled 6.7 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 54 c2v3bB_ not modelled 6.7 50 PDB header:oxidoreductase Chain: B: PDB Molecule:rubredoxin 2; PDBTitle: crystal structure of the electron transfer complex2 rubredoxin - rubredoxin reductase from pseudomonas3 aeruginosa. 55 d4rxna_ not modelled 6.7 67 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 56 d1dx8a_ not modelled 6.7 67 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 57 d1ftza_ not modelled 6.7 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 58 d1bcoa1 not modelled 6.6 35 Fold:mu transposase, C-terminal domain Superfamily:mu transposase, C-terminal domain Family:mu transposase, C-terminal domain 59 d9anta_ not modelled 6.5 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 60 d1jgga_ not modelled 6.4 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 61 d2hddb_ not modelled 6.4 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 62 c2da1A_ not modelled 6.4 19 PDB header:transcription Chain: A: PDB Molecule:alpha-fetoprotein enhancer binding protein; PDBTitle: solution structure of the first homeobox domain of at-2 binding transcription factor 1 (atbf1) 63 d2craa1 not modelled 6.4 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 64 d1qasa3 not modelled 6.3 83 Fold:TIM beta/alpha-barrel Superfamily:PLC-like phosphodiesterases Family:Mammalian PLC 65 c2dmqA_ not modelled 6.3 13 PDB header:dna binding protein Chain: A: PDB Molecule:lim/homeobox protein lhx9; PDBTitle: solution structure of the homeobox domain of lim/homeobox2 protein lhx9 66 c2dmuA_ not modelled 6.0 25 PDB header:dna binding protein Chain: A: PDB Molecule:homeobox protein goosecoid; PDBTitle: solution structure of the homeobox domain of homeobox2 protein goosecoid 67 d1fjla_ not modelled 6.0 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 68 d1wh5a_ not modelled 6.0 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 69 d1gvda_ not modelled 5.8 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Myb/SANT domain 70 d1y74a1 not modelled 5.8 25 Fold:L27 domain Superfamily:L27 domain Family:L27 domain 71 d1hcra_ not modelled 5.7 37 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain 72 c2da4A_ not modelled 5.6 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein dkfzp686k21156; PDBTitle: solution structure of the homeobox domain of the2 hypothetical protein, dkfzp686k21156 73 c2kn9A_ not modelled 5.6 50 PDB header:electron transport Chain: A: PDB Molecule:rubredoxin; PDBTitle: solution structure of zinc-substituted rubredoxin b (rv3250c) from2 mycobacterium tuberculosis. seattle structural genomics center for3 infectious disease target mytud.01635.a 74 c2l9rA_ not modelled 5.5 19 PDB header:transcription Chain: A: PDB Molecule:homeobox protein nkx-3.1; PDBTitle: solution nmr structure of homeobox domain of homeobox protein nkx-3.12 from homo sapiens, northeast structural genomics consortium target3 hr6470a 75 d1q8la_ not modelled 5.4 18 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 76 d2o5ha1 not modelled 5.4 21 Fold:NMB0513-like Superfamily:NMB0513-like Family:NMB0513-like 77 c2hfpB_ not modelled 5.4 83 PDB header:transcription Chain: B: PDB Molecule:src peptide fragment; PDBTitle: crystal structure of ppar gamma with n-sulfonyl-2-indole2 carboxamide ligands 78 d2obba1 not modelled 5.4 24 Fold:HAD-like Superfamily:HAD-like Family:BT0820-like 79 d1eexa_ not modelled 5.3 60 Fold:TIM beta/alpha-barrel Superfamily:Cobalamin (vitamin B12)-dependent enzymes Family:Diol dehydratase, alpha subunit 80 c1fm9E_ not modelled 5.3 83 PDB header:transcription Chain: E: PDB Molecule:steroid receptor coactivator; PDBTitle: the 2.1 angstrom resolution crystal structure of the2 heterodimer of the human rxralpha and ppargamma ligand3 binding domains respectively bound with 9-cis retinoic4 acid and gi262570 and co-activator peptides. 81 c1k74E_ not modelled 5.3 83 PDB header:transcription Chain: E: PDB Molecule:steroid receptor coactivator; PDBTitle: the 2.3 angstrom resolution crystal structure of the2 heterodimer of the human ppargamma and rxralpha ligand3 binding domains respectively bound with gw409544 and 9-cis4 retinoic acid and co-activator peptides. 82 c1fm6E_ not modelled 5.3 83 PDB header:transcription Chain: E: PDB Molecule:steroid receptor coactivator; PDBTitle: the 2.1 angstrom resolution crystal structure of the2 heterodimer of the human rxralpha and ppargamma ligand3 binding domains respectively bound with 9-cis retinoic4 acid and rosiglitazone and co-activator peptides. 83 c2djnA_ not modelled 5.3 19 PDB header:transcription Chain: A: PDB Molecule:homeobox protein dlx-5; PDBTitle: the solution structure of the homeobox domain of human2 homeobox protein dlx-5 84 c3kmgE_ not modelled 5.3 83 PDB header:transcription Chain: E: PDB Molecule:steroid receptor coactivator-1; PDBTitle: the x-ray crystal structure of ppar-gamma in complex with an indole2 derivative modulator, gsk538, and an src-1 peptide 85 c1fm6V_ not modelled 5.3 83 PDB header:transcription Chain: V: PDB Molecule:steroid receptor coactivator; PDBTitle: the 2.1 angstrom resolution crystal structure of the2 heterodimer of the human rxralpha and ppargamma ligand3 binding domains respectively bound with 9-cis retinoic4 acid and rosiglitazone and co-activator peptides. 86 c1p8dC_ not modelled 5.3 71 PDB header:membrane protein/protein binding Chain: C: PDB Molecule:nuclear receptor coactivator 1 isoform 3; PDBTitle: x-ray crystal structure of lxr ligand binding domain with 24(s),25-2 epoxycholesterol 87 d1b8ia_ not modelled 5.3 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 88 c1p8dD_ not modelled 5.3 83 PDB header:membrane protein/protein binding Chain: D: PDB Molecule:nuclear receptor coactivator 1 isoform 3; PDBTitle: x-ray crystal structure of lxr ligand binding domain with 24(s),25-2 epoxycholesterol 89 c1k7lB_ not modelled 5.3 71 PDB header:transcription Chain: B: PDB Molecule:steroid receptor coactivator; PDBTitle: the 2.5 angstrom resolution crystal structure of the human2 pparalpha ligand binding domain bound with gw409544 and a3 co-activator peptide. 90 c1k7lD_ not modelled 5.3 71 PDB header:transcription Chain: D: PDB Molecule:steroid receptor coactivator; PDBTitle: the 2.5 angstrom resolution crystal structure of the human2 pparalpha ligand binding domain bound with gw409544 and a3 co-activator peptide. 91 c1k7lF_ not modelled 5.3 71 PDB header:transcription Chain: F: PDB Molecule:steroid receptor coactivator; PDBTitle: the 2.5 angstrom resolution crystal structure of the human2 pparalpha ligand binding domain bound with gw409544 and a3 co-activator peptide. 92 c1k7lH_ not modelled 5.3 71 PDB header:transcription Chain: H: PDB Molecule:steroid receptor coactivator; PDBTitle: the 2.5 angstrom resolution crystal structure of the human2 pparalpha ligand binding domain bound with gw409544 and a3 co-activator peptide. 93 c2ypnA_ not modelled 5.2 19 PDB header:transferase Chain: A: PDB Molecule:protein (hydroxymethylbilane synthase); PDBTitle: hydroxymethylbilane synthase 94 c2dmsA_ not modelled 5.1 25 PDB header:dna binding protein Chain: A: PDB Molecule:homeobox protein otx2; PDBTitle: solution structure of the homeobox domain of homeobox2 protein otx2