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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3h3yF_

Fold library idPDB HeaderMoleculeTitle
c3h3yF_PDB header: viral proteinChain: F: PDB Molecule: baseplate structural protein gp6;PDBTitle: fitting of the gp6 crystal structure into 3d cryo-em2 reconstruction of bacteriophage t4 star-shaped baseplate


Added to library: Sun Aug 29 00:31:10 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ATDYDTFVSERFGSIIQAVQTFTDSTKPGYAFIAAKPKSGLYLTTVQREDIKNYLKDYNLAPITPSIISP
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Known secondary structure (DSSP)
TTTT
TTSTT
SSSS


TTTTTS


S




 .........80.........90.........100.........110.........120.........130.........140
Sequence NYLFIKTNLKVTYALNKLQESEQWLEGQIIDKIDRYYTEDVEIFNSSFAKSKMLTYVDDADHSVIGSSAT
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Known secondary structure (DSSP) STT

S
TSSTT

TTSTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence IQMVREVQNFYKTPEAGIKYNNQIKDRSMESNTFSFNSGRKVVNPDTGLEEDVLYDVRIVSTDRDSKGIG
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Known secondary structure (DSSP) S
SSB

SS
B

SS
B
TT








GGGSS








TTSB
 .........220.........230.........240.........250.........260.........270.........280
Sequence KVIIGPFASGDVTENENIQPYTGNDFNKLANSDGRDKYYVIGEINYPADVIYWNIAKINLTSEKFEVQTI
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Known secondary structure (DSSP)

GGGS

BTTB






S




SSS

STTTT
BGGGGS

GGGBS
S
 .........290.........300.........310.........320....
Sequence ELYSDPTDDVIFTRDGSLIVFENDLRPQYLTIDLEPISQLEHHH
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Known secondary structure (DSSP)

BSSS


TT


TTT
GGGSS
S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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