Job Description P0AAX3 Confidence 3.03% Date Thu Jan 5 11:14:03 GMT 2012 Rank 77 Aligned Residues 38 % Identity 26% Template c2xgyA_ PDB info PDB header:viral protein/isomerase Chain: A: PDB Molecule:relik capsid n-terminal domain; PDBTitle: complex of rabbit endogenous lentivirus (relik)capsid with2 cyclophilin a Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	V	F	A	A	E	P	V	T	A	S	Q	A	Q	N	M	N	K	I	G	V	V	S	A	D	G	A	S	T	L	D	A	L	E	A	K	L	A	E	K	A	A	A
Query Conservation
Alig confidence																								.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.
Template Sequence		F	G	V	I	S	I	N	F	T	S	V	D	I	N	M	L	L	N	V	T	P	G	.	.	.	.	.	.	A	E	K	Q	L	V	I	D	K	I	K	E	K	A	I	A
Template Known Secondary structure						T	T	T													S			.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.							.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions