Return to main results Retrieve Phyre Job Id

Job DescriptionP27240
Confidence99.56%DateThu Jan 5 11:43:19 GMT 2012
Rank217Aligned Residues180
% Identity12%Templated1nxka_
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60.........70.........80.........90.........100.......
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  FLSYNINIIKVFRSIDDTKVMLIDTDYGKLILKVFSPKVKRNERFFKSLLKGDYYERLFEQTQKVRNEGLNTLNDFYLLA
Query Conservation           
 
       
  
         
                                             
 
Alig confidence 







































...............
























Template Conservation 

  
 
    

 
 

 

 
        



 
   ...............     
                   
Template Sequence  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDC. . . . . . . . . . . . . . . PKARREVELHWRASQCPHIVRIVDV
Template Known Secondary structure  GGGTTTTTT


S...............TTSTTB

Template Predicted Secondary structure 










...............







Template SS confidence 















































































   5960.........70.........80.........90........ .100.........110.........120...
 
   108.110.........120.........130... ......140.........150.........160.........170 ......
Predicted Secondary structure 










.......










....
Query SS confidence 

























. . . . . . .




































. . . .





Query Sequence  ERKTLRFVHTYIMIIEYIDGIELCDM. . . . . . . PDIDDALKNKIQQSINALHQHGMVSGDPHRGNFIIKN. . . . GEVRII
Query Conservation              
  
   
      .......          
      

     
 
    
     ....      
Alig confidence 

























.......




































....





Template Conservation              

 
      
                        
                                
Template Sequence  YENLYAGRKCLLIVXECLDGGELFSRIQDRAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT
Template Known Secondary structure  TT


S



BTT




GGGSSSSTT


Template Predicted Secondary structure 

























































Template SS confidence 















































































   124.....130.........140.........150.........160.........170.........180.........190.........200...
 
   177..180.........190.........200.........210.........220..
Predicted Secondary structure 





















Query SS confidence 













































Query Sequence  DLSGKRASAQRKAKDRIDLERHYGIKNEIRDLGYYLLVYRKKMRNF
Query Conservation 
                          
    
             
Alig confidence 













































Template Conservation                             

 
 
        
  

Template Sequence  DFGFAKETTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF
Template Known Secondary structure 

TT



TT

GGGS



SSSSS
S
Template Predicted Secondary structure 





































Template SS confidence 













































   207..210.........220.........230.........240.........250..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions